EnhancerDB
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  3. rs6688473[chr1:154783773]
Enhancers that have rs6688473[chr1:154783773]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154772139 154826495 enh644
Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Esophagus Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Embryonic Stem Cell Line (H1-hESC) Muscle (Myotube) Uterus Thymus Stomach
chr1 154783587 154784004 vista3397
VISTA
Transcript factors that have rs6688473[chr1:154783773]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154783456 154786418 ZNF274 GTRD no Blood (GM12878) 21340726
chr1 154783456 154786418 ZNF274 GTRD no Blood (GM12878) 107833387
chr1 154783456 154786418 ZNF274 GTRD no Blood (GM12878) 107833388
chr1 154783617 154785853 ZNF274 GTRD no Blood (GM12878) 21340727
chr1 154783617 154785853 ZNF274 GTRD no Blood (GM12878) 107833389
chr1 154783617 154785853 ZNF274 GTRD no Blood (GM12878) 107833390
chr1 154783674 154786338 ZNF274 GTRD no Blood (GM12878) 21340728
chr1 154783674 154786338 ZNF274 GTRD no Blood (GM12878) 107833391
chr1 154783674 154786338 ZNF274 GTRD no Blood (GM12878) 107833392
chr1 154783763 154783778 RUNX2 JASPAR yes 32313206
chr1 154783763 154783778 RUNX2 JASPAR yes 118373977
Genes associated with rs6688473[chr1:154783773], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More