EnhancerDB
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  3. vista342[chr1:10849807-10850141]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista342[chr1:10849807-10850141]
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Tissue distribution of vista342
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Transcription factor that possibly regulate vista342[chr1:10849807-10850141]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 10849805 10849820 FOXP1 JASPAR yes 26748001
chr1 10849805 10849820 FOXP1 JASPAR yes 118229297
chr1 10849805 10849826 IRF1 JASPAR yes 26748002
chr1 10849805 10849826 IRF1 JASPAR yes 118229298
chr1 10849809 10849823 STAT1 JASPAR yes 26748003
chr1 10849809 10849823 STAT1 JASPAR yes 118229299
chr1 10849809 10849824 STAT2 JASPAR yes 26748004
chr1 10849809 10849824 STAT2 JASPAR yes 118229300
chr1 10849820 10849830 MZF1 JASPAR yes 26748005
chr1 10849820 10849830 MZF1 JASPAR yes 118229301
chr1 10849820 10849832 INSM1 JASPAR yes 26748006
chr1 10849820 10849832 INSM1 JASPAR yes 118229302
chr1 10849838 10849842 NFE TRANSFAC yes 26748007
chr1 10849838 10849842 NFE TRANSFAC yes 118229303
chr1 10849847 10849863 GLIS1 JASPAR yes 26748008
chr1 10849847 10849863 GLIS1 JASPAR yes 118229304
chr1 10849862 10849877 HNF4A JASPAR yes 26748009
chr1 10849862 10849877 HNF4A JASPAR yes 118229305
chr1 10849863 10849878 HNF4G JASPAR yes 26748010
chr1 10849863 10849878 HNF4G JASPAR yes 118229306
chr1 10849870 10849891 ZNF263 JASPAR yes 26748011
chr1 10849870 10849891 ZNF263 JASPAR yes 118229307
chr1 10849912 10849923 HOXC13 JASPAR yes 26748012
chr1 10849912 10849923 HOXC13 JASPAR yes 118229308
chr1 10849918 10849921 MYB TRANSFAC yes 26748013
chr1 10849918 10849921 MYB TRANSFAC yes 118229309
chr1 10849930 10849940 BARHL2 JASPAR yes 26748014
chr1 10849930 10849940 BARHL2 JASPAR yes 118229310
chr1 10849939 10849952 DUXA JASPAR yes 26748015
chr1 10849939 10849952 DUXA JASPAR yes 118229311
chr1 10849940 10849951 DUX4 JASPAR yes 26748016
chr1 10849940 10849951 DUX4 JASPAR yes 118229312
chr1 10849956 10849966 HOXC10 JASPAR yes 26748017
chr1 10849956 10849966 HOXD11 JASPAR yes 26748018
chr1 10849956 10849966 HOXC10 JASPAR yes 118229313
chr1 10849956 10849966 HOXD11 JASPAR yes 118229314
chr1 10849956 10849967 HOXC11 JASPAR yes 26748019
chr1 10849956 10849967 HOXC12 JASPAR yes 26748020
chr1 10849956 10849967 HOXC13 JASPAR yes 26748021
chr1 10849956 10849967 HOXD12 JASPAR yes 26748022
chr1 10849956 10849967 HOXC11 JASPAR yes 118229315
chr1 10849956 10849967 HOXC12 JASPAR yes 118229316
chr1 10849956 10849967 HOXC13 JASPAR yes 118229317
chr1 10849956 10849967 HOXD12 JASPAR yes 118229318
chr1 10849968 10849983 IRF9 JASPAR yes 26748023
chr1 10849968 10849983 IRF9 JASPAR yes 118229319
chr1 10849982 10849988 MZF1 JASPAR yes 26748024
chr1 10849982 10849988 MZF1 JASPAR yes 118229320
chr1 10850015 10850018 MYB TRANSFAC yes 26748025
chr1 10850015 10850018 MYB TRANSFAC yes 118229321
chr1 10850023 10850040 RARA JASPAR yes 26748026
chr1 10850023 10850040 RARA JASPAR yes 118229322
chr1 10850023 10850042 CTCF JASPAR yes 26748027
chr1 10850023 10850042 CTCF JASPAR yes 118229323
chr1 10850033 10850038 SP1 TRANSFAC yes 26748028
chr1 10850033 10850038 SP1 TRANSFAC yes 118229324
chr1 10850039 10850057 ESR1 JASPAR yes 26748029
chr1 10850039 10850057 ESR1 JASPAR yes 118229325
chr1 10850041 10850056 ESR2 JASPAR yes 26748030
chr1 10850041 10850056 ESR2 JASPAR yes 118229326
chr1 10850042 10850047 SP1 TRANSFAC yes 26748031
chr1 10850042 10850047 SP1 TRANSFAC yes 118229327
chr1 10850043 10850053 ZNF740 JASPAR yes 26748032
chr1 10850043 10850053 ZNF740 JASPAR yes 118229328
chr1 10850044 10850057 NFKB1 JASPAR yes 26748033
chr1 10850044 10850057 NFKB2 JASPAR yes 26748034
chr1 10850044 10850057 NFKB1 JASPAR yes 118229329
chr1 10850044 10850057 NFKB2 JASPAR yes 118229330
chr1 10850045 10850056 NFKB1 JASPAR yes 26748035
chr1 10850045 10850056 NFKB1 JASPAR yes 118229331
chr1 10850052 10850062 SP1 JASPAR yes 26748036
chr1 10850052 10850062 SP1 JASPAR yes 118229332
chr1 10850053 10850063 SP1 JASPAR yes 26748037
chr1 10850053 10850063 SP1 JASPAR yes 118229333
chr1 10850054 10850060 SP1 TRANSFAC yes 26748038
chr1 10850054 10850060 SP1 TRANSFAC yes 118229334
chr1 10850054 10850064 SP1 JASPAR yes 26748039
chr1 10850054 10850064 SP1 JASPAR yes 118229335
chr1 10850060 10850074 PLAG1 JASPAR yes 26748040
chr1 10850060 10850074 PLAG1 JASPAR yes 118229336
chr1 10850067 10850081 ZIC1 JASPAR yes 26748041
chr1 10850067 10850081 ZIC1 JASPAR yes 118229337
chr1 10850067 10850082 ZIC3 JASPAR yes 26748042
chr1 10850067 10850082 ZIC4 JASPAR yes 26748043
chr1 10850067 10850082 ZIC3 JASPAR yes 118229338
chr1 10850067 10850082 ZIC4 JASPAR yes 118229339
chr1 10850116 10850126 NHLH1 JASPAR yes 26748044
chr1 10850116 10850126 NHLH1 JASPAR yes 118229340
chr1 10850127 10850132 SP1 TRANSFAC yes 26748045
chr1 10850127 10850132 SP1 TRANSFAC yes 118229341
SNP sites on vista342[chr1:10849807-10850141]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 10849811 rs138082136 G GA
FOXP1 IRF1 STAT1 STAT2
75152
chr1 10849811 rs142974484 G GA
FOXP1 IRF1 STAT1 STAT2
75153
chr1 10850037 rs367878659 G A
CTCF RARA SP1
75154
chr1 10850040 rs79058729 C T
CTCF ESR1 RARA
75155
chr1 10850045 rs1292700 T C,G
ESR1 ESR2 NFKB1 NFKB2 SP1 ZNF740
75156
chr1 10850130 rs140410433 G A
SP1
75157
Genes possibly regulated by vista342[chr1:10849807-10850141]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 10696661 10856707 - CASZ1 ENSG00000130940.10 10856707 0.83 1.0 141 93434
Expression level of Genes
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miRNAs possibly regulated by vista342[chr1:10849807-10850141]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr12 97885729 97885749 + hsa-miR-1251-3p MIMAT0026741 97858914 0.00014911559029206088 0.944286 0.676023 324
Expression level of miRNAs
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