EnhancerDB
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  3. rs79058729[chr1:10850040]
Enhancers that have rs79058729[chr1:10850040]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 10819865 10855515 enh58077
Skin (Keratinocyte) Prostate (PC-3) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Stomach Muscle (A673) Lung (PC-9) Pancreas Pancreas (Panc1) Uterus Heart
chr1 10849807 10850141 vista342
VISTA
Transcript factors that have rs79058729[chr1:10850040]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 10849396 10850173 TCF7L2 GTRD no Colon (HCT116) 107802057
chr1 10850023 10850040 RARA JASPAR yes 26748026
chr1 10850023 10850040 RARA JASPAR yes 118229322
chr1 10850023 10850042 CTCF JASPAR yes 26748027
chr1 10850023 10850042 CTCF JASPAR yes 118229323
chr1 10850039 10850057 ESR1 JASPAR yes 26748029
chr1 10850039 10850057 ESR1 JASPAR yes 118229325
Genes associated with rs79058729[chr1:10850040], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More