EnhancerDB
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  3. vista34370[chr2:201990242-201990732]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista34370[chr2:201990242-201990732]
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Tissue distribution of vista34370
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Transcription factor that possibly regulate vista34370[chr2:201990242-201990732]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 201988317 201990929 POLR2A UCSC Txn Factor no Conserved 108434877
chr2 201988317 201990929 POLR2A UCSC Txn Factor no Conserved 108434878
chr2 201990212 201990715 EP300 UCSC Txn Factor no Conserved 108434879
chr2 201990270 201990714 CTCF UCSC Txn Factor no Conserved 108434880
chr2 201990355 201990619 EBF1 UCSC Txn Factor no Conserved 108434881
chr2 201990361 201990638 RUNX3 UCSC Txn Factor no Conserved 108434882
chr2 201990480 201990632 TEAD4 UCSC Txn Factor no Conserved 108434883
chr2 201990241 201990245 LFA1 TRANSFAC yes 22191945
chr2 201990241 201990245 LFA1 TRANSFAC yes 80136092
chr2 201990256 201990271 TFAP2C JASPAR yes 22191946
chr2 201990256 201990271 TFAP2C JASPAR yes 80136093
chr2 201990259 201990270 TFAP2A JASPAR yes 22191947
chr2 201990259 201990270 TFAP2B JASPAR yes 22191948
chr2 201990259 201990270 TFAP2C JASPAR yes 22191949
chr2 201990259 201990270 TFAP2A JASPAR yes 80136094
chr2 201990259 201990270 TFAP2B JASPAR yes 80136095
chr2 201990259 201990270 TFAP2C JASPAR yes 80136096
chr2 201990260 201990269 TFAP2A JASPAR yes 22191950
chr2 201990260 201990269 TFAP2A JASPAR yes 80136097
chr2 201990286 201990298 TAL1 JASPAR yes 22191951
chr2 201990286 201990298 TAL1 JASPAR yes 80136098
chr2 201990287 201990299 NHLH1 JASPAR yes 22191952
chr2 201990287 201990299 NHLH1 JASPAR yes 80136099
chr2 201990288 201990298 TFAP4 JASPAR yes 22191953
chr2 201990288 201990298 TFAP4 JASPAR yes 80136100
chr2 201990295 201990316 ZNF263 JASPAR yes 22191954
chr2 201990295 201990316 ZNF263 JASPAR yes 80136101
chr2 201990296 201990300 LFA1 TRANSFAC yes 22191955
chr2 201990296 201990300 LFA1 TRANSFAC yes 80136102
chr2 201990305 201990320 NR2C2 JASPAR yes 22191956
chr2 201990305 201990320 NR2C2 JASPAR yes 80136103
chr2 201990332 201990343 DMRT3 JASPAR yes 22191957
chr2 201990332 201990343 DMRT3 JASPAR yes 80136104
chr2 201990347 201990353 HiNF-A TRANSFAC yes 22191958
chr2 201990347 201990353 HiNF-A TRANSFAC yes 80136105
chr2 201990354 201990369 ZIC3 JASPAR yes 22191959
chr2 201990354 201990369 ZIC3 JASPAR yes 80136106
chr2 201990354 201990374 RREB1 JASPAR yes 22191960
chr2 201990354 201990374 RREB1 JASPAR yes 80136107
chr2 201990357 201990377 RREB1 JASPAR yes 22191961
chr2 201990357 201990377 RREB1 JASPAR yes 80136108
chr2 201990381 201990397 SOX8 JASPAR yes 22191962
chr2 201990381 201990397 SOX8 JASPAR yes 80136109
chr2 201990397 201990408 NFKB1 JASPAR yes 22191963
chr2 201990397 201990408 NFKB1 JASPAR yes 80136110
chr2 201990445 201990455 GABPA JASPAR yes 22191964
chr2 201990445 201990455 GABPA JASPAR yes 80136111
chr2 201990445 201990460 STAT1 JASPAR yes 22191965
chr2 201990445 201990460 STAT1 JASPAR yes 80136112
chr2 201990447 201990458 STAT1 JASPAR yes 22191966
chr2 201990447 201990458 STAT1 JASPAR yes 80136113
chr2 201990452 201990467 PRDM1 JASPAR yes 22191967
chr2 201990452 201990467 STAT2 JASPAR yes 22191968
chr2 201990452 201990467 PRDM1 JASPAR yes 80136114
chr2 201990452 201990467 STAT2 JASPAR yes 80136115
chr2 201990452 201990470 IRF2 JASPAR yes 22191969
chr2 201990452 201990470 IRF2 JASPAR yes 80136116
chr2 201990472 201990485 TFAP2B JASPAR yes 22191970
chr2 201990472 201990485 TFAP2B JASPAR yes 80136117
chr2 201990479 201990484 SP1 TRANSFAC yes 22191971
chr2 201990479 201990484 SP1 TRANSFAC yes 80136118
chr2 201990494 201990513 CTCF JASPAR yes 22191972
chr2 201990494 201990513 CTCF JASPAR yes 80136119
chr2 201990504 201990524 RREB1 JASPAR yes 22191973
chr2 201990504 201990524 RREB1 JASPAR yes 80136120
chr2 201990512 201990520 FOXC1 JASPAR yes 22191974
chr2 201990512 201990520 FOXC1 JASPAR yes 80136121
chr2 201990528 201990542 GATA2 JASPAR yes 22191975
chr2 201990528 201990542 GATA2 JASPAR yes 80136122
chr2 201990532 201990540 GATA5 JASPAR yes 22191976
chr2 201990532 201990540 GATA5 JASPAR yes 80136123
chr2 201990534 201990555 ZNF263 JASPAR yes 22191977
chr2 201990534 201990555 ZNF263 JASPAR yes 80136124
chr2 201990546 201990554 EHF JASPAR yes 22191978
chr2 201990546 201990554 EHF JASPAR yes 80136125
chr2 201990548 201990553 ETS2 TRANSFAC yes 22191979
chr2 201990548 201990553 ETS2 TRANSFAC yes 80136126
chr2 201990568 201990589 ZNF263 JASPAR yes 22191980
chr2 201990568 201990589 ZNF263 JASPAR yes 80136127
chr2 201990588 201990602 SPI1 JASPAR yes 22191981
chr2 201990588 201990602 SPIC JASPAR yes 22191982
chr2 201990588 201990602 SPI1 JASPAR yes 80136128
chr2 201990588 201990602 SPIC JASPAR yes 80136129
chr2 201990590 201990608 SRF JASPAR yes 22191983
chr2 201990590 201990608 SRF JASPAR yes 80136130
chr2 201990592 201990602 POU6F2 JASPAR yes 22191984
chr2 201990592 201990602 POU6F2 JASPAR yes 80136131
chr2 201990593 201990603 GSX1 JASPAR yes 22191985
chr2 201990593 201990603 NOTO JASPAR yes 22191986
chr2 201990593 201990603 GSX1 JASPAR yes 80136132
chr2 201990593 201990603 NOTO JASPAR yes 80136133
chr2 201990594 201990602 NKX6-1 JASPAR yes 22191987
chr2 201990594 201990602 NKX6-2 JASPAR yes 22191988
chr2 201990594 201990602 NKX6-1 JASPAR yes 80136134
chr2 201990594 201990602 NKX6-2 JASPAR yes 80136135
chr2 201990596 201990600 YY1 TRANSFAC yes 22191989
chr2 201990596 201990600 YY1 TRANSFAC yes 80136136
chr2 201990632 201990649 BCL6B JASPAR yes 22191990
chr2 201990632 201990649 BCL6B JASPAR yes 80136137
chr2 201990648 201990659 NFKB1 JASPAR yes 22191991
chr2 201990648 201990659 NFKB1 JASPAR yes 80136138
chr2 201990656 201990676 PPARG JASPAR yes 22191992
chr2 201990656 201990676 PPARG JASPAR yes 80136139
chr2 201990659 201990674 ESR2 JASPAR yes 22191993
chr2 201990659 201990674 ESR2 JASPAR yes 80136140
chr2 201990666 201990670 ESR1 TRANSFAC yes 22191994
chr2 201990666 201990670 ESR1 TRANSFAC yes 80136141
chr2 201990686 201990699 SMAD2 JASPAR yes 22191995
chr2 201990686 201990699 SMAD2 JASPAR yes 80136142
chr2 201990697 201990708 E2F6 JASPAR yes 22191996
chr2 201990697 201990708 E2F6 JASPAR yes 80136143
chr2 201990714 201990724 ALX3 JASPAR yes 22191997
chr2 201990714 201990724 HESX1 JASPAR yes 22191998
chr2 201990714 201990724 ALX3 JASPAR yes 80136144
chr2 201990714 201990724 HESX1 JASPAR yes 80136145
chr2 201990718 201990723 MYB TRANSFAC yes 22191999
chr2 201990718 201990723 MYB TRANSFAC yes 80136146
SNP sites on vista34370[chr2:201990242-201990732]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 201990457 rs10165532 A G
CTCF EBF1 EP300 IRF2 POLR2A PRDM1 RUNX3 STAT1 STAT2
6293283
chr2 201990540 rs13015648 T G
CTCF EBF1 EP300 GATA2 GATA5 POLR2A RUNX3 TEAD4 ZNF263
6293284
chr2 201990726 rs62191477 A G
POLR2A
6293285
Genes possibly regulated by vista34370[chr2:201990242-201990732]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 201838441 201936394 - FAM126B ENSG00000155744.5 201936394 0.73 0.98 3045 46152
chr2 201936156 201950473 + NDUFB3 ENSG00000119013.4 201936156 0.89 0.98 3046 45914
chr2 201980827 202041410 + CFLAR ENSG00000003402.15 201980827 0.8 0.99 3047 90585
chr2 202047604 202094129 + CASP10 ENSG00000003400.10 202047604 0.85 0.99 3048 43128
Expression level of Genes
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miRNAs possibly regulated by vista34370[chr2:201990242-201990732]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results