EnhancerDB
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  3. rs13015648[chr2:201990540]
Enhancers that have rs13015648[chr2:201990540]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 201984705 201999595 enh6105
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Blood (T-cell) Esophagus Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Uterus Thymus
chr2 201990242 201990732 vista34370
VISTA
Transcript factors that have rs13015648[chr2:201990540]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 201988317 201990929 POLR2A UCSC Txn Factor no Conserved 108434877
chr2 201988317 201990929 POLR2A UCSC Txn Factor no Conserved 108434878
chr2 201990212 201990715 EP300 UCSC Txn Factor no Conserved 108434879
chr2 201990270 201990714 CTCF UCSC Txn Factor no Conserved 108434880
chr2 201990355 201990619 EBF1 UCSC Txn Factor no Conserved 108434881
chr2 201990361 201990638 RUNX3 UCSC Txn Factor no Conserved 108434882
chr2 201990480 201990632 TEAD4 UCSC Txn Factor no Conserved 108434883
chr2 201990528 201990542 GATA2 JASPAR yes 22191975
chr2 201990528 201990542 GATA2 JASPAR yes 80136122
chr2 201990532 201990540 GATA5 JASPAR yes 22191976
chr2 201990532 201990540 GATA5 JASPAR yes 80136123
chr2 201990534 201990555 ZNF263 JASPAR yes 22191977
chr2 201990534 201990555 ZNF263 JASPAR yes 80136124
Genes associated with rs13015648[chr2:201990540], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More