EnhancerDB
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  3. vista34917[chr2:225392496-225392764]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista34917[chr2:225392496-225392764]
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Tissue distribution of vista34917
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Transcription factor that possibly regulate vista34917[chr2:225392496-225392764]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 225392485 225392496 NFIL3 JASPAR yes 22217011
chr2 225392485 225392496 NFIL3 JASPAR yes 81338206
chr2 225392499 225392503 YY1 TRANSFAC yes 22217012
chr2 225392499 225392503 YY1 TRANSFAC yes 81338207
chr2 225392525 225392536 FLI1 JASPAR yes 22217013
chr2 225392525 225392536 FLI1 JASPAR yes 81338208
chr2 225392529 225392534 ETS2 TRANSFAC yes 22217014
chr2 225392529 225392534 ETS2 TRANSFAC yes 81338209
chr2 225392535 225392538 MYB TRANSFAC yes 22217015
chr2 225392535 225392538 MYB TRANSFAC yes 81338210
chr2 225392558 225392562 YY1 TRANSFAC yes 22217016
chr2 225392558 225392562 YY1 TRANSFAC yes 81338211
chr2 225392574 225392578 NFE TRANSFAC yes 22217017
chr2 225392574 225392578 NFE TRANSFAC yes 81338212
chr2 225392574 225392579 GATA1 TRANSFAC yes 22217018
chr2 225392574 225392579 GATA1 TRANSFAC yes 81338213
chr2 225392574 225392580 GATA3 JASPAR yes 22217019
chr2 225392574 225392580 GATA3 JASPAR yes 81338214
chr2 225392600 225392611 E2F6 JASPAR yes 22217020
chr2 225392600 225392611 E2F6 JASPAR yes 81338215
chr2 225392606 225392619 HSF1 JASPAR yes 22217021
chr2 225392606 225392619 HSF1 JASPAR yes 81338216
chr2 225392613 225392617 NFE TRANSFAC yes 22217022
chr2 225392613 225392617 NFE TRANSFAC yes 81338217
chr2 225392620 225392630 RELA JASPAR yes 22217023
chr2 225392620 225392630 REL JASPAR yes 22217024
chr2 225392620 225392630 RELA JASPAR yes 81338218
chr2 225392620 225392630 REL JASPAR yes 81338219
chr2 225392620 225392631 NFKB1 JASPAR yes 22217025
chr2 225392620 225392631 NFKB1 JASPAR yes 81338220
chr2 225392626 225392631 ETS2 TRANSFAC yes 22217026
chr2 225392626 225392631 ETS2 TRANSFAC yes 81338221
chr2 225392631 225392635 YY1 TRANSFAC yes 22217027
chr2 225392631 225392635 YY1 TRANSFAC yes 81338222
chr2 225392654 225392662 FOXC1 JASPAR yes 22217028
chr2 225392654 225392662 FOXC1 JASPAR yes 81338223
chr2 225392655 225392676 REST JASPAR yes 22217029
chr2 225392655 225392676 REST JASPAR yes 81338224
chr2 225392656 225392663 NKX3-1 JASPAR yes 22217030
chr2 225392656 225392663 NKX3-1 JASPAR yes 81338225
chr2 225392665 225392672 NFATC2 JASPAR yes 22217031
chr2 225392665 225392672 NFATC2 JASPAR yes 81338226
chr2 225392668 225392678 RORA JASPAR yes 22217032
chr2 225392668 225392678 RORA JASPAR yes 81338227
chr2 225392669 225392682 NR2F1 JASPAR yes 22217033
chr2 225392669 225392682 NR2F1 JASPAR yes 81338228
chr2 225392671 225392679 NR4A2 JASPAR yes 22217034
chr2 225392671 225392679 NR4A2 JASPAR yes 81338229
chr2 225392673 225392677 ESR1 TRANSFAC yes 22217035
chr2 225392673 225392677 ESR1 TRANSFAC yes 81338230
chr2 225392683 225392686 MYB TRANSFAC yes 22217036
chr2 225392683 225392686 MYB TRANSFAC yes 81338231
chr2 225392703 225392711 HOXA5 JASPAR yes 22217037
chr2 225392703 225392711 HOXA5 JASPAR yes 81338232
chr2 225392704 225392724 PPARG JASPAR yes 22217038
chr2 225392704 225392724 PPARG JASPAR yes 81338233
chr2 225392707 225392716 NFIX JASPAR yes 22217039
chr2 225392707 225392716 NFIX JASPAR yes 81338234
chr2 225392707 225392717 NFIA JASPAR yes 22217040
chr2 225392707 225392717 NFIA JASPAR yes 81338235
chr2 225392708 225392717 HIC2 JASPAR yes 22217041
chr2 225392708 225392717 HIC2 JASPAR yes 81338236
chr2 225392709 225392715 NFIC JASPAR yes 22217042
chr2 225392709 225392715 NFIC JASPAR yes 81338237
chr2 225392715 225392729 RORA JASPAR yes 22217043
chr2 225392715 225392729 RORA JASPAR yes 81338238
chr2 225392726 225392731 GATA2 JASPAR yes 22217044
chr2 225392726 225392731 GATA2 JASPAR yes 81338239
chr2 225392731 225392742 TBX20 JASPAR yes 22217045
chr2 225392731 225392742 TBX20 JASPAR yes 81338240
chr2 225392745 225392753 RHOXF1 JASPAR yes 22217046
chr2 225392745 225392753 RHOXF1 JASPAR yes 81338241
chr2 225392746 225392756 PAX3 JASPAR yes 22217047
chr2 225392746 225392756 PAX7 JASPAR yes 22217048
chr2 225392746 225392756 PAX3 JASPAR yes 81338242
chr2 225392746 225392756 PAX7 JASPAR yes 81338243
chr2 225392746 225392757 PROP1 JASPAR yes 22217049
chr2 225392746 225392757 PROP1 JASPAR yes 81338244
chr2 225392751 225392755 YY1 TRANSFAC yes 22217050
chr2 225392751 225392755 YY1 TRANSFAC yes 81338245
chr2 225392755 225392759 YY1 TRANSFAC yes 22217051
chr2 225392755 225392759 YY1 TRANSFAC yes 81338246
chr2 225392756 225392766 TBR1 JASPAR yes 22217052
chr2 225392756 225392766 TBR1 JASPAR yes 81338247
chr2 225392756 225392767 TBX20 JASPAR yes 22217053
chr2 225392756 225392767 TBX2 JASPAR yes 22217054
chr2 225392756 225392767 TBX20 JASPAR yes 81338248
chr2 225392756 225392767 TBX2 JASPAR yes 81338249
chr2 225392757 225392767 TBX21 JASPAR yes 22217055
chr2 225392757 225392767 TBX21 JASPAR yes 81338250
SNP sites on vista34917[chr2:225392496-225392764]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 225392514 rs182252996 T C no 6399888
chr2 225392564 rs533796538 C T no 6399889
chr2 225392643 rs146221455 C T no 6399890
chr2 225392729 rs367580534 TC T
GATA2 RORA
6399891
Genes possibly regulated by vista34917[chr2:225392496-225392764]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 225334867 225450110 - CUL3 ENSG00000036257.8 225450110 0.74 0.99 3199 42654
Expression level of Genes
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miRNAs possibly regulated by vista34917[chr2:225392496-225392764]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results