EnhancerDB
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  3. rs367580534[chr2:225392729]
Enhancers that have rs367580534[chr2:225392729]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 225380709 225396539 enh6176
Skin (Keratinocyte) Prostate (PC-3) Blood (T-cell) Lung (PC-9) Esophagus Astrocyte Liver Blood (OCI-LY7) Lung (A549) Blood (GM12878) Stomach Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Breast Thymus Epithelial (MCF-7)
chr2 225392496 225392764 vista34917
VISTA
Transcript factors that have rs367580534[chr2:225392729]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 225392715 225392729 RORA JASPAR yes 22217043
chr2 225392715 225392729 RORA JASPAR yes 81338238
chr2 225392726 225392731 GATA2 JASPAR yes 22217044
chr2 225392726 225392731 GATA2 JASPAR yes 81338239
Genes associated with rs367580534[chr2:225392729], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More