EnhancerDB
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  3. vista35019[chr2:228270733-228271155]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35019[chr2:228270733-228271155]
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Tissue distribution of vista35019
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Transcription factor that possibly regulate vista35019[chr2:228270733-228271155]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 228270805 228271165 CTCF UCSC Txn Factor no Conserved 108435508
chr2 228270826 228271648 EP300 UCSC Txn Factor no Conserved 108435509
chr2 228270849 228271126 SMC3 UCSC Txn Factor no Conserved 108435510
chr2 228270865 228271229 TEAD4 UCSC Txn Factor no Conserved 108435511
chr2 228270867 228271145 RAD21 UCSC Txn Factor no Conserved 108435512
chr2 228270901 228271202 NFIC UCSC Txn Factor no Conserved 108435513
chr2 228270908 228271168 FOSL2 UCSC Txn Factor no Conserved 108435514
chr2 228270746 228270756 HOXA13 JASPAR yes 22222129
chr2 228270746 228270756 HOXB13 JASPAR yes 22222130
chr2 228270746 228270756 HOXA13 JASPAR yes 81519697
chr2 228270746 228270756 HOXB13 JASPAR yes 81519698
chr2 228270747 228270756 CDX1 JASPAR yes 22222131
chr2 228270747 228270756 CDX1 JASPAR yes 81519699
chr2 228270747 228270758 CDX2 JASPAR yes 22222132
chr2 228270747 228270758 CDX2 JASPAR yes 81519700
chr2 228270764 228270768 YY1 TRANSFAC yes 22222133
chr2 228270764 228270768 YY1 TRANSFAC yes 81519701
chr2 228270771 228270774 MYB TRANSFAC yes 22222134
chr2 228270771 228270774 MYB TRANSFAC yes 81519702
chr2 228270776 228270782 TCF1 TRANSFAC yes 22222135
chr2 228270776 228270782 TCF1 TRANSFAC yes 81519703
chr2 228270776 228270783 TCF4 TRANSFAC yes 22222136
chr2 228270776 228270783 TCF4 TRANSFAC yes 81519704
chr2 228270814 228270822 HOXA5 JASPAR yes 22222137
chr2 228270814 228270822 HOXA5 JASPAR yes 81519705
chr2 228270819 228270834 HSF1 JASPAR yes 22222138
chr2 228270819 228270834 HSF1 JASPAR yes 81519706
chr2 228270820 228270833 HSF1 JASPAR yes 22222139
chr2 228270820 228270833 HSF2 JASPAR yes 22222140
chr2 228270820 228270833 HSF4 JASPAR yes 22222141
chr2 228270820 228270833 HSF1 JASPAR yes 81519707
chr2 228270820 228270833 HSF2 JASPAR yes 81519708
chr2 228270820 228270833 HSF4 JASPAR yes 81519709
chr2 228270824 228270839 HSF1 JASPAR yes 22222142
chr2 228270824 228270839 HSF1 JASPAR yes 81519710
chr2 228270825 228270838 HSF1 JASPAR yes 22222143
chr2 228270825 228270838 HSF2 JASPAR yes 22222144
chr2 228270825 228270838 HSF4 JASPAR yes 22222145
chr2 228270825 228270838 HSF1 JASPAR yes 81519711
chr2 228270825 228270838 HSF2 JASPAR yes 81519712
chr2 228270825 228270838 HSF4 JASPAR yes 81519713
chr2 228270846 228270861 STAT1 JASPAR yes 22222146
chr2 228270846 228270861 STAT1 JASPAR yes 81519714
chr2 228270848 228270859 STAT1 JASPAR yes 22222147
chr2 228270848 228270859 STAT3 JASPAR yes 22222148
chr2 228270848 228270859 STAT1 JASPAR yes 81519715
chr2 228270848 228270859 STAT3 JASPAR yes 81519716
chr2 228270849 228270857 STAT6 TRANSFAC yes 22222149
chr2 228270849 228270857 STAT6 TRANSFAC yes 81519717
chr2 228270916 228270919 MYB TRANSFAC yes 22222150
chr2 228270916 228270919 MYB TRANSFAC yes 81519718
chr2 228270941 228270945 YY1 TRANSFAC yes 22222151
chr2 228270941 228270945 YY1 TRANSFAC yes 81519719
chr2 228270944 228270956 NHLH1 JASPAR yes 22222152
chr2 228270944 228270956 NHLH1 JASPAR yes 81519720
chr2 228270945 228270954 SNAI2 JASPAR yes 22222153
chr2 228270945 228270954 SNAI2 JASPAR yes 81519721
chr2 228270945 228270955 ID4 JASPAR yes 22222154
chr2 228270945 228270955 NHLH1 JASPAR yes 22222155
chr2 228270945 228270955 TCF3 JASPAR yes 22222156
chr2 228270945 228270955 TCF4 JASPAR yes 22222157
chr2 228270945 228270955 ID4 JASPAR yes 81519722
chr2 228270945 228270955 NHLH1 JASPAR yes 81519723
chr2 228270945 228270955 TCF3 JASPAR yes 81519724
chr2 228270945 228270955 TCF4 JASPAR yes 81519725
chr2 228270945 228270960 HSF1 JASPAR yes 22222158
chr2 228270945 228270960 HSF1 JASPAR yes 81519726
chr2 228270964 228270973 NFIX JASPAR yes 22222159
chr2 228270964 228270973 NFIX JASPAR yes 81519727
chr2 228270964 228270974 NFIA JASPAR yes 22222160
chr2 228270964 228270974 NFIA JASPAR yes 81519728
chr2 228270966 228270972 NFIC JASPAR yes 22222161
chr2 228270966 228270972 NFIC JASPAR yes 81519729
chr2 228270980 228270999 CTCF JASPAR yes 22222162
chr2 228270980 228270999 CTCF JASPAR yes 81519730
chr2 228270993 228271007 MTF1 JASPAR yes 22222163
chr2 228270993 228271007 MTF1 JASPAR yes 81519731
chr2 228271003 228271023 ESR1 JASPAR yes 22222164
chr2 228271003 228271023 ESR1 JASPAR yes 81519732
chr2 228271028 228271033 ETS2 TRANSFAC yes 22222165
chr2 228271028 228271033 ETS2 TRANSFAC yes 81519733
chr2 228271066 228271081 MEF2C JASPAR yes 22222166
chr2 228271066 228271081 MEF2C JASPAR yes 81519734
chr2 228271071 228271077 TBP TRANSFAC yes 22222167
chr2 228271071 228271077 TBP TRANSFAC yes 81519735
chr2 228271071 228271086 HNF1A JASPAR yes 22222168
chr2 228271071 228271086 HNF1A JASPAR yes 81519736
chr2 228271081 228271084 MYB TRANSFAC yes 22222169
chr2 228271081 228271084 MYB TRANSFAC yes 81519737
chr2 228271083 228271089 SOX10 JASPAR yes 22222170
chr2 228271083 228271089 SOX10 JASPAR yes 81519738
chr2 228271094 228271104 SP1 JASPAR yes 22222171
chr2 228271094 228271104 SP1 JASPAR yes 81519739
chr2 228271096 228271102 MAZ TRANSFAC yes 22222172
chr2 228271096 228271102 MAZ TRANSFAC yes 81519740
chr2 228271097 228271107 MZF1 JASPAR yes 22222173
chr2 228271097 228271107 MZF1 JASPAR yes 81519741
chr2 228271098 228271113 HNF4G JASPAR yes 22222174
chr2 228271098 228271113 NR2C2 JASPAR yes 22222175
chr2 228271098 228271113 HNF4G JASPAR yes 81519742
chr2 228271098 228271113 NR2C2 JASPAR yes 81519743
chr2 228271099 228271113 RXRB JASPAR yes 22222176
chr2 228271099 228271113 RXRG JASPAR yes 22222177
chr2 228271099 228271113 RXRB JASPAR yes 81519744
chr2 228271099 228271113 RXRG JASPAR yes 81519745
chr2 228271101 228271105 LFA1 TRANSFAC yes 22222178
chr2 228271101 228271105 LFA1 TRANSFAC yes 81519746
chr2 228271117 228271130 DUXA JASPAR yes 22222179
chr2 228271117 228271130 DUXA JASPAR yes 81519747
chr2 228271118 228271129 DUX4 JASPAR yes 22222180
chr2 228271118 228271129 DUX4 JASPAR yes 81519748
chr2 228271134 228271145 FLI1 JASPAR yes 22222181
chr2 228271134 228271145 FLI1 JASPAR yes 81519749
chr2 228271135 228271142 PEA3 TRANSFAC yes 22222182
chr2 228271135 228271142 PEA3 TRANSFAC yes 81519750
chr2 228271137 228271152 JUND JASPAR yes 22222183
chr2 228271137 228271152 JUND JASPAR yes 81519751
chr2 228271138 228271151 JUN JASPAR yes 22222184
chr2 228271138 228271151 JUN JASPAR yes 81519752
chr2 228271140 228271152 JDP2 JASPAR yes 22222185
chr2 228271140 228271152 JDP2 JASPAR yes 81519753
SNP sites on vista35019[chr2:228270733-228271155]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 228270861 rs138233696 T C
CTCF EP300 SMC3 STAT1
6415271
chr2 228270893 rs56393175 G A,C,T
CTCF EP300 RAD21 SMC3 TEAD4
6415272
chr2 228270936 rs35881315 T C
CTCF EP300 FOSL2 NFIC RAD21 SMC3 TEAD4
6415273
chr2 228270943 rs187078959 A G
CTCF EP300 FOSL2 NFIC RAD21 SMC3 TEAD4 YY1
6415274
chr2 228270964 rs55754816 C T
CTCF EP300 FOSL2 NFIA NFIC NFIX RAD21 SMC3 TEAD4
6415275
chr2 228270965 rs114643520 G A,C
CTCF EP300 FOSL2 NFIA NFIC NFIX RAD21 SMC3 TEAD4
6415276
chr2 228271052 rs62189368 T C
CTCF EP300 FOSL2 NFIC RAD21 SMC3 TEAD4
6415277
chr2 228271078 rs548039044 A G
CTCF EP300 FOSL2 HNF1A MEF2C NFIC RAD21 SMC3 TEAD4
6415278
Genes possibly regulated by vista35019[chr2:228270733-228271155]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 228189867 228222550 + MFF ENSG00000168958.15 228189867 0.69 0.99 3206 19134
chr2 228226872 228246711 - TM4SF20 ENSG00000168955.3 228246711 0.95 1.0 3207 75978
chr2 228336868 228425930 + AGFG1 ENSG00000173744.13 228336868 0.81 0.99 3208 34287
Expression level of Genes
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miRNAs possibly regulated by vista35019[chr2:228270733-228271155]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results