EnhancerDB
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  3. vista35250[chr2:235204346-235204543]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35250[chr2:235204346-235204543]
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Tissue distribution of vista35250
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Transcription factor that possibly regulate vista35250[chr2:235204346-235204543]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 235204345 235204360 FOXP1 JASPAR yes 22233713
chr2 235204345 235204360 FOXP1 JASPAR yes 81863775
chr2 235204346 235204361 FOXP1 JASPAR yes 22233714
chr2 235204346 235204361 FOXP1 JASPAR yes 81863776
chr2 235204346 235204367 IRF1 JASPAR yes 22233715
chr2 235204346 235204367 IRF1 JASPAR yes 81863777
chr2 235204347 235204362 FOXP1 JASPAR yes 22233716
chr2 235204347 235204362 FOXP1 JASPAR yes 81863778
chr2 235204349 235204364 FOXP1 JASPAR yes 22233717
chr2 235204349 235204364 FOXP1 JASPAR yes 81863779
chr2 235204349 235204370 IRF1 JASPAR yes 22233718
chr2 235204349 235204370 IRF1 JASPAR yes 81863780
chr2 235204350 235204371 IRF1 JASPAR yes 22233719
chr2 235204350 235204371 IRF1 JASPAR yes 81863781
chr2 235204351 235204366 FOXP1 JASPAR yes 22233720
chr2 235204351 235204366 FOXP1 JASPAR yes 81863782
chr2 235204359 235204373 ONECUT2 JASPAR yes 22233721
chr2 235204359 235204373 ONECUT3 JASPAR yes 22233722
chr2 235204359 235204373 ONECUT2 JASPAR yes 81863783
chr2 235204359 235204373 ONECUT3 JASPAR yes 81863784
chr2 235204359 235204374 HNF1A JASPAR yes 22233723
chr2 235204359 235204374 HNF1A JASPAR yes 81863785
chr2 235204362 235204374 FOXI1 JASPAR yes 22233724
chr2 235204362 235204374 FOXI1 JASPAR yes 81863786
chr2 235204369 235204372 MYB TRANSFAC yes 22233725
chr2 235204369 235204372 MYB TRANSFAC yes 81863787
chr2 235204396 235204400 YY1 TRANSFAC yes 22233726
chr2 235204396 235204400 YY1 TRANSFAC yes 81863788
chr2 235204405 235204416 CDX2 JASPAR yes 22233727
chr2 235204405 235204416 CDX2 JASPAR yes 81863789
chr2 235204406 235204417 HOXA10 JASPAR yes 22233728
chr2 235204406 235204417 HOXA10 JASPAR yes 81863790
chr2 235204407 235204416 CDX1 JASPAR yes 22233729
chr2 235204407 235204416 CDX1 JASPAR yes 81863791
chr2 235204421 235204427 ZNF354C JASPAR yes 22233730
chr2 235204421 235204427 ZNF354C JASPAR yes 81863792
chr2 235204423 235204428 GATA2 JASPAR yes 22233731
chr2 235204423 235204428 GATA2 JASPAR yes 81863793
chr2 235204426 235204436 ETV6 JASPAR yes 22233732
chr2 235204426 235204436 ETV6 JASPAR yes 81863794
chr2 235204428 235204440 E2F8 JASPAR yes 22233733
chr2 235204428 235204440 E2F8 JASPAR yes 81863795
chr2 235204459 235204470 CEBPB JASPAR yes 22233734
chr2 235204459 235204470 CEBPB JASPAR yes 81863796
chr2 235204464 235204485 IRF1 JASPAR yes 22233735
chr2 235204464 235204485 IRF1 JASPAR yes 81863797
chr2 235204467 235204481 STAT1 JASPAR yes 22233736
chr2 235204467 235204481 STAT1 JASPAR yes 81863798
chr2 235204468 235204480 IRF1 JASPAR yes 22233737
chr2 235204468 235204480 IRF1 JASPAR yes 81863799
chr2 235204473 235204477 YY1 TRANSFAC yes 22233738
chr2 235204473 235204477 YY1 TRANSFAC yes 81863800
chr2 235204482 235204492 POU6F1 JASPAR yes 22233739
chr2 235204482 235204492 POU6F1 JASPAR yes 81863801
chr2 235204485 235204489 YY1 TRANSFAC yes 22233740
chr2 235204485 235204489 YY1 TRANSFAC yes 81863802
chr2 235204485 235204493 HOXA5 JASPAR yes 22233741
chr2 235204485 235204493 HOXA5 JASPAR yes 81863803
chr2 235204487 235204503 E2F2 JASPAR yes 22233742
chr2 235204487 235204503 E2F2 JASPAR yes 81863804
chr2 235204503 235204506 MYB TRANSFAC yes 22233743
chr2 235204503 235204506 MYB TRANSFAC yes 81863805
chr2 235204504 235204514 CLOCK JASPAR yes 22233744
chr2 235204504 235204514 MYF6 JASPAR yes 22233745
chr2 235204504 235204514 NEUROG2 JASPAR yes 22233746
chr2 235204504 235204514 CLOCK JASPAR yes 81863806
chr2 235204504 235204514 MYF6 JASPAR yes 81863807
chr2 235204504 235204514 NEUROG2 JASPAR yes 81863808
chr2 235204505 235204515 MAX JASPAR yes 22233747
chr2 235204505 235204515 MAX JASPAR yes 81863809
chr2 235204526 235204546 RREB1 JASPAR yes 22233748
chr2 235204526 235204546 RREB1 JASPAR yes 81863810
chr2 235204536 235204556 RREB1 JASPAR yes 22233749
chr2 235204536 235204556 RREB1 JASPAR yes 81863811
chr2 235204542 235204562 RREB1 JASPAR yes 22233750
chr2 235204542 235204562 RREB1 JASPAR yes 81863812
chr2 235204542 235204563 IRF1 JASPAR yes 22233751
chr2 235204542 235204563 IRF1 JASPAR yes 81863813
SNP sites on vista35250[chr2:235204346-235204543]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 235204348 rs398061198 CAAA C
FOXP1 IRF1
6451170
chr2 235204348 rs72189983 CAAA C
FOXP1 IRF1
6451171
chr2 235204348 rs869285022 CAAA C
FOXP1 IRF1
6451172
chr2 235204406 rs111995676 G T
CDX2 HOXA10
6451173
chr2 235204421 rs12467783 C T
ZNF354C
6451174
chr2 235204449 rs111592309 C T no 6451175
chr2 235204496 rs77980104 G A
E2F2
6451176
chr2 235204535 rs116396045 T C
RREB1
6451177
chr2 235204537 rs10194758 T G
RREB1
6451178
Genes possibly regulated by vista35250[chr2:235204346-235204543]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista35250[chr2:235204346-235204543]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results