EnhancerDB
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  3. rs398061198[chr2:235204348]
Enhancers that have rs398061198[chr2:235204348]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 235192981 235207115 enh6214
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1)
chr2 235204346 235204543 vista35250
VISTA
Transcript factors that have rs398061198[chr2:235204348]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 235204345 235204360 FOXP1 JASPAR yes 22233713
chr2 235204345 235204360 FOXP1 JASPAR yes 81863775
chr2 235204346 235204361 FOXP1 JASPAR yes 22233714
chr2 235204346 235204361 FOXP1 JASPAR yes 81863776
chr2 235204346 235204367 IRF1 JASPAR yes 22233715
chr2 235204346 235204367 IRF1 JASPAR yes 81863777
chr2 235204347 235204362 FOXP1 JASPAR yes 22233716
chr2 235204347 235204362 FOXP1 JASPAR yes 81863778
Genes associated with rs398061198[chr2:235204348], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More