EnhancerDB
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  3. vista35410[chr2:238398938-238399241]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35410[chr2:238398938-238399241]
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Tissue distribution of vista35410
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Transcription factor that possibly regulate vista35410[chr2:238398938-238399241]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 238398693 238399103 POLR2A UCSC Txn Factor no Conserved 108435918
chr2 238398976 238399246 SP1 UCSC Txn Factor no Conserved 108435919
chr2 238398944 238398963 PAX5 JASPAR yes 22241625
chr2 238398944 238398963 PAX5 JASPAR yes 82115575
chr2 238398965 238398980 MEF2C JASPAR yes 22241626
chr2 238398965 238398980 MEF2C JASPAR yes 82115576
chr2 238398966 238398981 MEF2A JASPAR yes 22241627
chr2 238398966 238398981 MEF2A JASPAR yes 82115577
chr2 238398968 238398983 FOXP1 JASPAR yes 22241628
chr2 238398968 238398983 FOXP1 JASPAR yes 82115578
chr2 238398969 238398975 TBP TRANSFAC yes 22241629
chr2 238398969 238398975 TBP TRANSFAC yes 82115579
chr2 238398970 238398985 FOXP1 JASPAR yes 22241630
chr2 238398970 238398985 FOXP1 JASPAR yes 82115580
chr2 238398971 238398992 IRF1 JASPAR yes 22241631
chr2 238398971 238398992 IRF1 JASPAR yes 82115581
chr2 238398972 238398987 FOXP1 JASPAR yes 22241632
chr2 238398972 238398987 FOXP1 JASPAR yes 82115582
chr2 238398975 238398989 SPIC JASPAR yes 22241633
chr2 238398975 238398989 STAT1 JASPAR yes 22241634
chr2 238398975 238398989 SPIC JASPAR yes 82115583
chr2 238398975 238398989 STAT1 JASPAR yes 82115584
chr2 238398975 238398990 PRDM1 JASPAR yes 22241635
chr2 238398975 238398990 STAT2 JASPAR yes 22241636
chr2 238398975 238398990 PRDM1 JASPAR yes 82115585
chr2 238398975 238398990 STAT2 JASPAR yes 82115586
chr2 238398992 238398996 YY1 TRANSFAC yes 22241637
chr2 238398992 238398996 YY1 TRANSFAC yes 82115587
chr2 238399000 238399021 ZNF263 JASPAR yes 22241638
chr2 238399000 238399021 ZNF263 JASPAR yes 82115588
chr2 238399001 238399022 ZNF263 JASPAR yes 22241639
chr2 238399001 238399022 ZNF263 JASPAR yes 82115589
chr2 238399003 238399008 GATA2 JASPAR yes 22241640
chr2 238399003 238399008 GATA2 JASPAR yes 82115590
chr2 238399012 238399022 SP1 JASPAR yes 22241641
chr2 238399012 238399022 SP1 JASPAR yes 82115591
chr2 238399014 238399020 MAZ TRANSFAC yes 22241642
chr2 238399014 238399020 MAZ TRANSFAC yes 82115592
chr2 238399026 238399031 GATA2 JASPAR yes 22241643
chr2 238399026 238399031 GATA2 JASPAR yes 82115593
chr2 238399064 238399072 NR4A2 JASPAR yes 22241644
chr2 238399064 238399072 NR4A2 JASPAR yes 82115594
chr2 238399074 238399079 GATA2 JASPAR yes 22241645
chr2 238399074 238399079 GATA2 JASPAR yes 82115595
chr2 238399081 238399092 ELK4 JASPAR yes 22241646
chr2 238399081 238399092 FLI1 JASPAR yes 22241647
chr2 238399081 238399092 ELK4 JASPAR yes 82115596
chr2 238399081 238399092 FLI1 JASPAR yes 82115597
chr2 238399081 238399094 ELF3 JASPAR yes 22241648
chr2 238399081 238399094 ELF3 JASPAR yes 82115598
chr2 238399082 238399092 ETV6 JASPAR yes 22241649
chr2 238399082 238399092 GABPA JASPAR yes 22241650
chr2 238399082 238399092 ETV6 JASPAR yes 82115599
chr2 238399082 238399092 GABPA JASPAR yes 82115600
chr2 238399082 238399093 ELF5 JASPAR yes 22241651
chr2 238399082 238399093 SPDEF JASPAR yes 22241652
chr2 238399082 238399093 ELF5 JASPAR yes 82115601
chr2 238399082 238399093 SPDEF JASPAR yes 82115602
chr2 238399082 238399094 EHF JASPAR yes 22241653
chr2 238399082 238399094 ELF1 JASPAR yes 22241654
chr2 238399082 238399094 ELF4 JASPAR yes 22241655
chr2 238399082 238399094 EHF JASPAR yes 82115603
chr2 238399082 238399094 ELF1 JASPAR yes 82115604
chr2 238399082 238399094 ELF4 JASPAR yes 82115605
chr2 238399082 238399095 ELF1 JASPAR yes 22241656
chr2 238399082 238399095 ELF1 JASPAR yes 82115606
chr2 238399083 238399090 SPI1 JASPAR yes 22241657
chr2 238399083 238399090 SPI1 JASPAR yes 82115607
chr2 238399083 238399091 EHF JASPAR yes 22241658
chr2 238399083 238399091 FEV JASPAR yes 22241659
chr2 238399083 238399091 EHF JASPAR yes 82115608
chr2 238399083 238399091 FEV JASPAR yes 82115609
chr2 238399084 238399099 RFX5 JASPAR yes 22241660
chr2 238399084 238399099 RFX5 JASPAR yes 82115610
chr2 238399090 238399094 ESR1 TRANSFAC yes 22241661
chr2 238399090 238399094 ESR1 TRANSFAC yes 82115611
chr2 238399092 238399107 AR JASPAR yes 22241662
chr2 238399092 238399107 AR JASPAR yes 82115612
chr2 238399107 238399117 TEAD1 JASPAR yes 22241663
chr2 238399107 238399117 TEAD1 JASPAR yes 82115613
chr2 238399143 238399164 IRF1 JASPAR yes 22241664
chr2 238399143 238399164 IRF1 JASPAR yes 82115614
chr2 238399145 238399150 ETS2 TRANSFAC yes 22241665
chr2 238399145 238399150 ETS2 TRANSFAC yes 82115615
chr2 238399147 238399159 IRF1 JASPAR yes 22241666
chr2 238399147 238399159 IRF1 JASPAR yes 82115616
chr2 238399148 238399169 IRF1 JASPAR yes 22241667
chr2 238399148 238399169 IRF1 JASPAR yes 82115617
chr2 238399149 238399155 TCF4 TRANSFAC yes 22241668
chr2 238399149 238399155 TCF4 TRANSFAC yes 82115618
chr2 238399149 238399164 FOXP1 JASPAR yes 22241669
chr2 238399149 238399164 FOXP1 JASPAR yes 82115619
chr2 238399150 238399165 STAT2 JASPAR yes 22241670
chr2 238399150 238399165 STAT2 JASPAR yes 82115620
chr2 238399152 238399164 IRF1 JASPAR yes 22241671
chr2 238399152 238399164 IRF1 JASPAR yes 82115621
chr2 238399152 238399167 IRF9 JASPAR yes 22241672
chr2 238399152 238399167 IRF9 JASPAR yes 82115622
chr2 238399227 238399248 ZNF263 JASPAR yes 22241673
chr2 238399227 238399248 ZNF263 JASPAR yes 82115623
SNP sites on vista35410[chr2:238398938-238399241]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 238398971 rs114792326 A G
FOXP1 IRF1 MEF2A MEF2C POLR2A TBP
6480167
chr2 238399005 rs73098871 G A
GATA2 POLR2A SP1 ZNF263
6480168
chr2 238399130 rs77956735 C T
SP1
6480169
chr2 238399160 rs143779634 C T
FOXP1 IRF1 IRF9 SP1 STAT2
6480170
chr2 238399213 rs148163100 T G
SP1
6480171
Genes possibly regulated by vista35410[chr2:238398938-238399241]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 238232646 238323018 - COL6A3 ENSG00000163359.11 238323018 0.8 0.98 3286 24080
chr2 238330063 238333919 - AC112721.1 ENSG00000222022.1 238333919 0.99 0.96 3287 34981
chr2 238394071 238463961 + MLPH ENSG00000115648.9 238394071 0.87 1.0 3288 95133
chr2 238475217 238475818 + PRLH ENSG00000071677.1 238475217 0.99 0.95 3289 24024
Expression level of Genes
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miRNAs possibly regulated by vista35410[chr2:238398938-238399241]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results