EnhancerDB
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  3. rs143779634[chr2:238399160]
Enhancers that have rs143779634[chr2:238399160]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238392088 238401750 enh19396
Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Bone (Osteoblast) Placenta Colon (HCT116) Thyroid Pancreas Neural Stem Cells (H9)
chr2 238398938 238399241 vista35410
VISTA
Transcript factors that have rs143779634[chr2:238399160]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238398976 238399246 SP1 UCSC Txn Factor no Conserved 108435919
chr2 238399143 238399164 IRF1 JASPAR yes 22241664
chr2 238399143 238399164 IRF1 JASPAR yes 82115614
chr2 238399148 238399169 IRF1 JASPAR yes 22241667
chr2 238399148 238399169 IRF1 JASPAR yes 82115617
chr2 238399149 238399164 FOXP1 JASPAR yes 22241669
chr2 238399149 238399164 FOXP1 JASPAR yes 82115619
chr2 238399150 238399165 STAT2 JASPAR yes 22241670
chr2 238399150 238399165 STAT2 JASPAR yes 82115620
chr2 238399152 238399164 IRF1 JASPAR yes 22241671
chr2 238399152 238399164 IRF1 JASPAR yes 82115621
chr2 238399152 238399167 IRF9 JASPAR yes 22241672
chr2 238399152 238399167 IRF9 JASPAR yes 82115622
Genes associated with rs143779634[chr2:238399160], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More