EnhancerDB
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  3. vista35420[chr2:238578518-238578831]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35420[chr2:238578518-238578831]
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Tissue distribution of vista35420
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Transcription factor that possibly regulate vista35420[chr2:238578518-238578831]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 238578213 238578531 RUNX3 UCSC Txn Factor no Conserved 108435936
chr2 238578213 238578531 RUNX3 UCSC Txn Factor no Conserved 108435937
chr2 238578501 238578519 SRF JASPAR yes 22242083
chr2 238578501 238578519 SRF JASPAR yes 82130053
chr2 238578506 238578518 SRF JASPAR yes 22242084
chr2 238578506 238578518 SRF JASPAR yes 82130055
chr2 238578520 238578534 CREB3L1 JASPAR yes 22242085
chr2 238578520 238578534 CREB3L1 JASPAR yes 82130056
chr2 238578521 238578531 MAX JASPAR yes 22242086
chr2 238578521 238578531 MAX JASPAR yes 82130057
chr2 238578522 238578532 HEY1 JASPAR yes 22242087
chr2 238578522 238578532 HEY2 JASPAR yes 22242088
chr2 238578522 238578532 MAX JASPAR yes 22242089
chr2 238578522 238578532 MNT JASPAR yes 22242090
chr2 238578522 238578532 HEY1 JASPAR yes 82130058
chr2 238578522 238578532 HEY2 JASPAR yes 82130059
chr2 238578522 238578532 MAX JASPAR yes 82130060
chr2 238578522 238578532 MNT JASPAR yes 82130061
chr2 238578523 238578533 MAX JASPAR yes 22242091
chr2 238578523 238578533 MAX JASPAR yes 82130062
chr2 238578524 238578529 MYC TRANSFAC yes 22242092
chr2 238578524 238578529 USF1 TRANSFAC yes 22242093
chr2 238578524 238578529 USF2 TRANSFAC yes 22242094
chr2 238578524 238578529 MYC TRANSFAC yes 82130063
chr2 238578524 238578529 USF1 TRANSFAC yes 82130064
chr2 238578524 238578529 USF2 TRANSFAC yes 82130065
chr2 238578524 238578531 USF1 JASPAR yes 22242095
chr2 238578524 238578531 USF1 JASPAR yes 82130066
chr2 238578551 238578563 E2F8 JASPAR yes 22242096
chr2 238578551 238578563 E2F8 JASPAR yes 82130067
chr2 238578568 238578579 BATF JASPAR yes 22242097
chr2 238578568 238578579 BATF JASPAR yes 82130068
chr2 238578588 238578593 NFY TRANSFAC yes 22242098
chr2 238578588 238578593 NFY TRANSFAC yes 82130069
chr2 238578592 238578597 SP1 TRANSFAC yes 22242099
chr2 238578592 238578597 SP1 TRANSFAC yes 82130070
chr2 238578607 238578621 POU1F1 JASPAR yes 22242100
chr2 238578607 238578621 POU1F1 JASPAR yes 82130071
chr2 238578608 238578620 POU3F1 JASPAR yes 22242101
chr2 238578608 238578620 POU3F2 JASPAR yes 22242102
chr2 238578608 238578620 POU3F1 JASPAR yes 82130072
chr2 238578608 238578620 POU3F2 JASPAR yes 82130073
chr2 238578608 238578621 POU3F3 JASPAR yes 22242103
chr2 238578608 238578621 POU3F3 JASPAR yes 82130074
chr2 238578609 238578621 POU2F1 JASPAR yes 22242104
chr2 238578609 238578621 POU2F1 JASPAR yes 82130075
chr2 238578610 238578619 POU3F4 JASPAR yes 22242105
chr2 238578610 238578619 POU5F1B JASPAR yes 22242106
chr2 238578610 238578619 POU3F4 JASPAR yes 82130076
chr2 238578610 238578619 POU5F1B JASPAR yes 82130077
chr2 238578642 238578654 TAL1 JASPAR yes 22242107
chr2 238578642 238578654 TAL1 JASPAR yes 82130078
chr2 238578643 238578655 NHLH1 JASPAR yes 22242108
chr2 238578643 238578655 NHLH1 JASPAR yes 82130079
chr2 238578644 238578654 TFAP4 JASPAR yes 22242109
chr2 238578644 238578654 TFAP4 JASPAR yes 82130080
chr2 238578651 238578656 ETS2 TRANSFAC yes 22242110
chr2 238578651 238578656 ETS2 TRANSFAC yes 82130081
chr2 238578678 238578682 LFA1 TRANSFAC yes 22242111
chr2 238578678 238578682 LFA1 TRANSFAC yes 82130082
chr2 238578681 238578685 YY1 TRANSFAC yes 22242112
chr2 238578681 238578685 YY1 TRANSFAC yes 82130083
chr2 238578689 238578703 E2F7 JASPAR yes 22242113
chr2 238578689 238578703 E2F7 JASPAR yes 82130084
chr2 238578693 238578698 SP1 TRANSFAC yes 22242114
chr2 238578693 238578698 SP1 TRANSFAC yes 82130085
chr2 238578699 238578705 GATA3 JASPAR yes 22242115
chr2 238578699 238578705 GATA3 JASPAR yes 82130086
chr2 238578704 238578719 MEF2A JASPAR yes 22242116
chr2 238578704 238578719 MEF2A JASPAR yes 82130087
chr2 238578705 238578720 MEF2C JASPAR yes 22242117
chr2 238578705 238578720 MEF2C JASPAR yes 82130088
chr2 238578706 238578718 MEF2A JASPAR yes 22242118
chr2 238578706 238578718 MEF2B JASPAR yes 22242119
chr2 238578706 238578718 MEF2D JASPAR yes 22242120
chr2 238578706 238578718 MEF2A JASPAR yes 82130089
chr2 238578706 238578718 MEF2B JASPAR yes 82130090
chr2 238578706 238578718 MEF2D JASPAR yes 82130091
chr2 238578707 238578717 MEF2A JASPAR yes 22242121
chr2 238578707 238578717 MEF2A JASPAR yes 82130092
chr2 238578718 238578723 ETS2 TRANSFAC yes 22242122
chr2 238578718 238578723 ETS2 TRANSFAC yes 82130093
chr2 238578728 238578740 POU3F1 JASPAR yes 22242123
chr2 238578728 238578740 POU3F1 JASPAR yes 82130094
chr2 238578728 238578741 POU2F2 JASPAR yes 22242124
chr2 238578728 238578741 POU2F2 JASPAR yes 82130095
chr2 238578759 238578764 GATA2 JASPAR yes 22242125
chr2 238578759 238578764 GATA2 JASPAR yes 82130096
chr2 238578762 238578766 YY1 TRANSFAC yes 22242126
chr2 238578762 238578766 YY1 TRANSFAC yes 82130097
chr2 238578772 238578779 SPIB JASPAR yes 22242127
chr2 238578772 238578779 SPIB JASPAR yes 82130098
chr2 238578789 238578807 SRF JASPAR yes 22242128
chr2 238578789 238578807 SRF JASPAR yes 82130099
chr2 238578792 238578804 SRF JASPAR yes 22242129
chr2 238578792 238578804 SRF JASPAR yes 82130100
chr2 238578804 238578808 NFE TRANSFAC yes 22242130
chr2 238578804 238578808 NFE TRANSFAC yes 82130101
chr2 238578804 238578809 GATA1 TRANSFAC yes 22242131
chr2 238578804 238578809 GATA1 TRANSFAC yes 82130102
chr2 238578804 238578810 GATA3 JASPAR yes 22242132
chr2 238578804 238578810 GATA3 JASPAR yes 82130103
chr2 238578809 238578825 RFX2 JASPAR yes 22242133
chr2 238578809 238578825 RFX3 JASPAR yes 22242134
chr2 238578809 238578825 RFX2 JASPAR yes 82130104
chr2 238578809 238578825 RFX3 JASPAR yes 82130105
chr2 238578810 238578818 MEIS2 JASPAR yes 22242135
chr2 238578810 238578818 MEIS3 JASPAR yes 22242136
chr2 238578810 238578818 MEIS2 JASPAR yes 82130106
chr2 238578810 238578818 MEIS3 JASPAR yes 82130107
chr2 238578811 238578815 NFE TRANSFAC yes 22242137
chr2 238578811 238578815 NFE TRANSFAC yes 82130108
chr2 238578822 238578835 ZBTB18 JASPAR yes 22242138
chr2 238578822 238578835 ZBTB18 JASPAR yes 82130109
chr2 238578823 238578833 MSC JASPAR yes 22242139
chr2 238578823 238578833 MSC JASPAR yes 82130110
SNP sites on vista35420[chr2:238578518-238578831]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 238578536 rs6733552 G A no 6482255
chr2 238578549 rs6723512 T C no 6482256
chr2 238578570 rs577595109 G C
BATF
6482257
chr2 238578599 rs543460740 G A no 6482258
chr2 238578612 rs190844376 T C
POU1F1 POU2F1 POU3F1 POU3F2 POU3F3 POU3F4 POU5F1B
6482259
chr2 238578621 rs573839879 T C
POU1F1 POU2F1 POU3F3
6482260
chr2 238578632 rs145815963 T C no 6482261
chr2 238578727 rs79753113 C T no 6482262
Genes possibly regulated by vista35420[chr2:238578518-238578831]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 238482965 238510257 - RAB17 ENSG00000124839.8 238510257 0.89 1.0 3290 31739
chr2 238499663 238504624 + AC104667.3 ENSG00000234949.2 238499663 0.86 1.0 3291 21145
chr2 238536219 238722325 + LRRFIP1 ENSG00000124831.14 238536219 0.62 1.0 3292 57701
Expression level of Genes
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miRNAs possibly regulated by vista35420[chr2:238578518-238578831]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results