EnhancerDB
  1. Home
  2. SNP
  3. rs573839879[chr2:238578621]
Enhancers that have rs573839879[chr2:238578621]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238567229 238591955 enh19400
Brain (SK-N-MC) Liver Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr2 238578518 238578831 vista35420
VISTA
Transcript factors that have rs573839879[chr2:238578621]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238578607 238578621 POU1F1 JASPAR yes 22242100
chr2 238578607 238578621 POU1F1 JASPAR yes 82130071
chr2 238578608 238578621 POU3F3 JASPAR yes 22242103
chr2 238578608 238578621 POU3F3 JASPAR yes 82130074
chr2 238578609 238578621 POU2F1 JASPAR yes 22242104
chr2 238578609 238578621 POU2F1 JASPAR yes 82130075
Genes associated with rs573839879[chr2:238578621], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More