EnhancerDB
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  3. vista35421[chr2:238581844-238582251]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35421[chr2:238581844-238582251]
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Tissue distribution of vista35421
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Transcription factor that possibly regulate vista35421[chr2:238581844-238582251]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 238581676 238582276 CTCF UCSC Txn Factor no Conserved 108435938
chr2 238581676 238582276 CTCF UCSC Txn Factor no Conserved 108435939
chr2 238581741 238582024 SMC3 UCSC Txn Factor no Conserved 108435940
chr2 238581745 238582011 RAD21 UCSC Txn Factor no Conserved 108435941
chr2 238581864 238581883 CTCF JASPAR yes 22242140
chr2 238581864 238581883 CTCF JASPAR yes 82130459
chr2 238581872 238581877 SP1 TRANSFAC yes 22242141
chr2 238581872 238581877 SP1 TRANSFAC yes 82130460
chr2 238581880 238581883 MYB TRANSFAC yes 22242142
chr2 238581880 238581883 MYB TRANSFAC yes 82130461
chr2 238581885 238581900 AR JASPAR yes 22242143
chr2 238581885 238581900 AR JASPAR yes 82130462
chr2 238581936 238581942 MAZ TRANSFAC yes 22242144
chr2 238581936 238581942 MAZ TRANSFAC yes 82130463
chr2 238581941 238581953 TFAP2A JASPAR yes 22242145
chr2 238581941 238581953 TFAP2B JASPAR yes 22242146
chr2 238581941 238581953 TFAP2C JASPAR yes 22242147
chr2 238581941 238581953 TFAP2A JASPAR yes 82130464
chr2 238581941 238581953 TFAP2B JASPAR yes 82130465
chr2 238581941 238581953 TFAP2C JASPAR yes 82130466
chr2 238581941 238581956 TFAP2A JASPAR yes 22242148
chr2 238581941 238581956 TFAP2A JASPAR yes 82130467
chr2 238581972 238581979 ETS1 TRANSFAC yes 22242149
chr2 238581972 238581979 ETS1 TRANSFAC yes 82130468
chr2 238581990 238582002 TFAP2A JASPAR yes 22242150
chr2 238581990 238582002 TFAP2B JASPAR yes 22242151
chr2 238581990 238582002 TFAP2C JASPAR yes 22242152
chr2 238581990 238582002 TFAP2A JASPAR yes 82130469
chr2 238581990 238582002 TFAP2B JASPAR yes 82130470
chr2 238581990 238582002 TFAP2C JASPAR yes 82130471
chr2 238581991 238582000 TFAP2A JASPAR yes 22242153
chr2 238581991 238582000 TFAP2A JASPAR yes 82130472
chr2 238582001 238582011 SMAD3 JASPAR yes 22242154
chr2 238582001 238582011 SMAD3 JASPAR yes 82130473
chr2 238582007 238582019 CREB1 JASPAR yes 22242155
chr2 238582007 238582019 CREB1 JASPAR yes 82130474
chr2 238582008 238582013 ATF1 TRANSFAC yes 22242156
chr2 238582008 238582013 ATF1 TRANSFAC yes 82130475
chr2 238582010 238582020 SREBF1 JASPAR yes 22242157
chr2 238582010 238582020 SREBF2 JASPAR yes 22242158
chr2 238582010 238582020 SREBF1 JASPAR yes 82130476
chr2 238582010 238582020 SREBF2 JASPAR yes 82130477
chr2 238582054 238582069 NR2C2 JASPAR yes 22242159
chr2 238582054 238582069 NR2C2 JASPAR yes 82130478
chr2 238582061 238582079 ESR2 JASPAR yes 22242160
chr2 238582061 238582079 ESR2 JASPAR yes 82130479
chr2 238582062 238582079 ESR1 JASPAR yes 22242161
chr2 238582062 238582079 ESR1 JASPAR yes 82130480
chr2 238582062 238582080 ESR1 JASPAR yes 22242162
chr2 238582062 238582080 ESR1 JASPAR yes 82130481
chr2 238582063 238582078 ESR2 JASPAR yes 22242163
chr2 238582063 238582078 ESR2 JASPAR yes 82130482
chr2 238582063 238582083 ESR1 JASPAR yes 22242164
chr2 238582063 238582083 ESR1 JASPAR yes 82130483
chr2 238582064 238582068 ESR1 TRANSFAC yes 22242165
chr2 238582064 238582068 ESR1 TRANSFAC yes 82130484
chr2 238582069 238582090 ZNF263 JASPAR yes 22242166
chr2 238582069 238582090 ZNF263 JASPAR yes 82130485
chr2 238582072 238582093 ZNF263 JASPAR yes 22242167
chr2 238582072 238582093 ZNF263 JASPAR yes 82130486
chr2 238582103 238582113 RELA JASPAR yes 22242168
chr2 238582103 238582113 RELA JASPAR yes 82130487
chr2 238582105 238582119 STAT1 JASPAR yes 22242169
chr2 238582105 238582119 STAT1 JASPAR yes 82130488
chr2 238582106 238582117 ETV2 JASPAR yes 22242170
chr2 238582106 238582117 ETV2 JASPAR yes 82130489
chr2 238582112 238582116 NFE TRANSFAC yes 22242171
chr2 238582112 238582116 NFE TRANSFAC yes 82130490
chr2 238582122 238582129 POU2F1 TRANSFAC yes 22242172
chr2 238582122 238582129 POU2F1 TRANSFAC yes 82130491
chr2 238582139 238582159 RREB1 JASPAR yes 22242173
chr2 238582139 238582159 RREB1 JASPAR yes 82130492
chr2 238582142 238582162 RREB1 JASPAR yes 22242174
chr2 238582142 238582162 RREB1 JASPAR yes 82130493
chr2 238582144 238582164 RREB1 JASPAR yes 22242175
chr2 238582144 238582164 RREB1 JASPAR yes 82130494
chr2 238582147 238582161 GLIS2 JASPAR yes 22242176
chr2 238582147 238582161 GLIS3 JASPAR yes 22242177
chr2 238582147 238582161 GLIS2 JASPAR yes 82130495
chr2 238582147 238582161 GLIS3 JASPAR yes 82130496
chr2 238582186 238582196 RUNX3 JASPAR yes 22242178
chr2 238582186 238582196 RUNX3 JASPAR yes 82130497
chr2 238582197 238582210 JUN JASPAR yes 22242179
chr2 238582197 238582210 JUN JASPAR yes 82130498
chr2 238582198 238582205 JUN TRANSFAC yes 22242180
chr2 238582198 238582205 JUN TRANSFAC yes 82130499
chr2 238582198 238582210 PKNOX2 JASPAR yes 22242181
chr2 238582198 238582210 PKNOX2 JASPAR yes 82130500
chr2 238582205 238582214 H4TF2 TRANSFAC yes 22242182
chr2 238582205 238582214 H4TF2 TRANSFAC yes 82130501
chr2 238582210 238582216 MZF1 JASPAR yes 22242183
chr2 238582210 238582216 MZF1 JASPAR yes 82130502
chr2 238582222 238582233 NRF1 JASPAR yes 22242184
chr2 238582222 238582233 NRF1 JASPAR yes 82130503
chr2 238582224 238582243 CTCF JASPAR yes 22242185
chr2 238582224 238582243 CTCF JASPAR yes 82130504
chr2 238582226 238582232 NFE2 TRANSFAC yes 22242186
chr2 238582226 238582232 NFE2 TRANSFAC yes 82130505
chr2 238582245 238582249 NFE TRANSFAC yes 22242187
chr2 238582245 238582249 NFE TRANSFAC yes 82130506
SNP sites on vista35421[chr2:238581844-238582251]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 238581846 rs11676780 C T
CTCF RAD21 SMC3
6482320
chr2 238581924 rs79508671 C T
CTCF RAD21 SMC3
6482321
chr2 238581925 rs574604537 G A
CTCF RAD21 SMC3
6482322
chr2 238581973 rs527553541 C T
CTCF ETS1 RAD21 SMC3
6482323
chr2 238581982 rs4663781 C T
CTCF RAD21 SMC3
6482324
chr2 238582131 rs79660215 C T
CTCF
6482325
chr2 238582137 rs180850547 G A
CTCF
6482326
chr2 238582163 rs79996022 T A,C
CTCF RREB1
6482327
chr2 238582181 rs143538867 G A
CTCF
6482328
chr2 238582225 rs74681893 G A
CTCF NRF1
6482329
Genes possibly regulated by vista35421[chr2:238581844-238582251]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 238482965 238510257 - RAB17 ENSG00000124839.8 238510257 0.89 1.0 3290 28413
chr2 238499663 238504624 + AC104667.3 ENSG00000234949.2 238499663 0.86 1.0 3291 17819
chr2 238536219 238722325 + LRRFIP1 ENSG00000124831.14 238536219 0.62 1.0 3292 54375
Expression level of Genes
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miRNAs possibly regulated by vista35421[chr2:238581844-238582251]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results