EnhancerDB
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  3. rs527553541[chr2:238581973]
Enhancers that have rs527553541[chr2:238581973]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238567229 238591955 enh19400
Brain (SK-N-MC) Liver Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr2 238581844 238582251 vista35421
VISTA
Transcript factors that have rs527553541[chr2:238581973]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238581676 238582276 CTCF UCSC Txn Factor no Conserved 108435938
chr2 238581676 238582276 CTCF UCSC Txn Factor no Conserved 108435939
chr2 238581741 238582024 SMC3 UCSC Txn Factor no Conserved 108435940
chr2 238581745 238582011 RAD21 UCSC Txn Factor no Conserved 108435941
chr2 238581972 238581979 ETS1 TRANSFAC yes 22242149
chr2 238581972 238581979 ETS1 TRANSFAC yes 82130468
Genes associated with rs527553541[chr2:238581973], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More