EnhancerDB
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  3. vista35432[chr2:238611190-238611575]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35432[chr2:238611190-238611575]
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Tissue distribution of vista35432
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Transcription factor that possibly regulate vista35432[chr2:238611190-238611575]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 238611439 238611901 GATA1 UCSC Txn Factor no Conserved 108435953
chr2 238611200 238611217 RARA JASPAR yes 22242723
chr2 238611200 238611217 RARA JASPAR yes 82134589
chr2 238611207 238611212 SP1 TRANSFAC yes 22242724
chr2 238611207 238611212 SP1 TRANSFAC yes 82134590
chr2 238611210 238611229 PAX5 JASPAR yes 22242725
chr2 238611210 238611229 PAX5 JASPAR yes 82134591
chr2 238611212 238611216 LFA1 TRANSFAC yes 22242726
chr2 238611212 238611216 LFA1 TRANSFAC yes 82134592
chr2 238611263 238611278 STAT2 JASPAR yes 22242727
chr2 238611263 238611278 STAT2 JASPAR yes 82134593
chr2 238611265 238611277 IRF1 JASPAR yes 22242728
chr2 238611265 238611277 IRF1 JASPAR yes 82134594
chr2 238611265 238611279 IRF7 JASPAR yes 22242729
chr2 238611265 238611279 IRF7 JASPAR yes 82134595
chr2 238611265 238611280 IRF9 JASPAR yes 22242730
chr2 238611265 238611280 IRF9 JASPAR yes 82134596
chr2 238611266 238611278 IRF1 JASPAR yes 22242731
chr2 238611266 238611278 IRF1 JASPAR yes 82134597
chr2 238611277 238611288 NFKB1 JASPAR yes 22242732
chr2 238611277 238611288 NFKB1 JASPAR yes 82134598
chr2 238611280 238611301 ZNF263 JASPAR yes 22242733
chr2 238611280 238611301 ZNF263 JASPAR yes 82134599
chr2 238611283 238611304 ZNF263 JASPAR yes 22242734
chr2 238611283 238611304 ZNF263 JASPAR yes 82134600
chr2 238611286 238611297 FLI1 JASPAR yes 22242735
chr2 238611286 238611297 FLI1 JASPAR yes 82134601
chr2 238611287 238611291 YY1 TRANSFAC yes 22242736
chr2 238611287 238611291 YY1 TRANSFAC yes 82134602
chr2 238611288 238611296 FEV JASPAR yes 22242737
chr2 238611288 238611296 FEV JASPAR yes 82134603
chr2 238611289 238611310 ZNF263 JASPAR yes 22242738
chr2 238611289 238611310 ZNF263 JASPAR yes 82134604
chr2 238611290 238611295 ETS2 TRANSFAC yes 22242739
chr2 238611290 238611295 ETS2 TRANSFAC yes 82134605
chr2 238611292 238611300 EHF JASPAR yes 22242740
chr2 238611292 238611300 EHF JASPAR yes 82134606
chr2 238611292 238611313 ZNF263 JASPAR yes 22242741
chr2 238611292 238611313 ZNF263 JASPAR yes 82134607
chr2 238611294 238611299 ETS2 TRANSFAC yes 22242742
chr2 238611294 238611299 ETS2 TRANSFAC yes 82134608
chr2 238611300 238611321 IRF1 JASPAR yes 22242743
chr2 238611300 238611321 IRF1 JASPAR yes 82134609
chr2 238611326 238611332 LEF1 TRANSFAC yes 22242744
chr2 238611326 238611332 SOX10 JASPAR yes 22242745
chr2 238611326 238611332 LEF1 TRANSFAC yes 82134610
chr2 238611326 238611332 SOX10 JASPAR yes 82134611
chr2 238611329 238611340 CEBPA JASPAR yes 22242746
chr2 238611329 238611340 CEBPA JASPAR yes 82134612
chr2 238611330 238611341 CEBPB JASPAR yes 22242747
chr2 238611330 238611341 CEBPB JASPAR yes 82134613
chr2 238611371 238611386 ZIC4 JASPAR yes 22242748
chr2 238611371 238611386 ZIC4 JASPAR yes 82134614
chr2 238611372 238611386 ZIC1 JASPAR yes 22242749
chr2 238611372 238611386 ZIC1 JASPAR yes 82134615
chr2 238611379 238611384 SP1 TRANSFAC yes 22242750
chr2 238611379 238611384 SP1 TRANSFAC yes 82134616
chr2 238611384 238611392 GATA3 JASPAR yes 22242751
chr2 238611384 238611392 GATA5 JASPAR yes 22242752
chr2 238611384 238611392 GATA3 JASPAR yes 82134617
chr2 238611384 238611392 GATA5 JASPAR yes 82134618
chr2 238611410 238611414 LFA1 TRANSFAC yes 22242753
chr2 238611410 238611414 LFA1 TRANSFAC yes 82134619
chr2 238611413 238611434 ZNF263 JASPAR yes 22242754
chr2 238611413 238611434 ZNF263 JASPAR yes 82134620
chr2 238611416 238611437 ZNF263 JASPAR yes 22242755
chr2 238611416 238611437 ZNF263 JASPAR yes 82134621
chr2 238611421 238611433 INSM1 JASPAR yes 22242756
chr2 238611421 238611433 INSM1 JASPAR yes 82134622
chr2 238611426 238611435 SP1 TRANSFAC yes 22242757
chr2 238611426 238611435 SP1 TRANSFAC yes 82134623
chr2 238611426 238611436 SP1 JASPAR yes 22242758
chr2 238611426 238611436 SP1 JASPAR yes 82134624
chr2 238611426 238611447 ZNF263 JASPAR yes 22242759
chr2 238611426 238611447 ZNF263 JASPAR yes 82134625
chr2 238611428 238611434 MAZ TRANSFAC yes 22242760
chr2 238611428 238611434 MAZ TRANSFAC yes 82134626
chr2 238611430 238611446 ZNF143 JASPAR yes 22242761
chr2 238611430 238611446 ZNF143 JASPAR yes 82134627
chr2 238611459 238611473 TLX1 JASPAR yes 22242762
chr2 238611459 238611473 TLX1 JASPAR yes 82134628
chr2 238611469 238611488 REST JASPAR yes 22242763
chr2 238611469 238611488 REST JASPAR yes 82134629
chr2 238611500 238611510 SP1 JASPAR yes 22242764
chr2 238611500 238611510 SP1 JASPAR yes 82134630
chr2 238611510 238611520 MYF6 JASPAR yes 22242765
chr2 238611510 238611520 MYF6 JASPAR yes 82134631
chr2 238611537 238611547 SP1 JASPAR yes 22242766
chr2 238611537 238611547 SP1 JASPAR yes 82134632
chr2 238611550 238611554 YY1 TRANSFAC yes 22242767
chr2 238611550 238611554 YY1 TRANSFAC yes 82134633
chr2 238611568 238611586 RARA JASPAR yes 22242768
chr2 238611568 238611586 RARA JASPAR yes 82134634
SNP sites on vista35432[chr2:238611190-238611575]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 238611344 rs189200893 A G no 6482780
chr2 238611372 rs73099020 G C
ZIC1 ZIC4
6482781
chr2 238611383 rs192864300 G A,T
SP1 ZIC1 ZIC4
6482782
chr2 238611487 rs185484847 C A,G
GATA1 REST
6482783
chr2 238611501 rs552596320 A G
GATA1 SP1
6482784
Genes possibly regulated by vista35432[chr2:238611190-238611575]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 238536219 238722325 + LRRFIP1 ENSG00000124831.14 238536219 0.62 1.0 3292 25029
chr2 238707032 238751451 + RBM44 ENSG00000177483.7 238707032 0.83 0.99 3293 4543
Expression level of Genes
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miRNAs possibly regulated by vista35432[chr2:238611190-238611575]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results