EnhancerDB
  1. Home
  2. SNP
  3. rs552596320[chr2:238611501]
Enhancers that have rs552596320[chr2:238611501]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238592145 238619475 enh19401
Astrocyte Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
chr2 238611190 238611575 vista35432
VISTA
Transcript factors that have rs552596320[chr2:238611501]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238611439 238611901 GATA1 UCSC Txn Factor no Conserved 108435953
chr2 238611500 238611510 SP1 JASPAR yes 22242764
chr2 238611500 238611510 SP1 JASPAR yes 82134630
Genes associated with rs552596320[chr2:238611501], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More