EnhancerDB
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  3. vista35439[chr2:238807318-238807662]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista35439[chr2:238807318-238807662]
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Tissue distribution of vista35439
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Transcription factor that possibly regulate vista35439[chr2:238807318-238807662]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr2 238807314 238807335 IRF1 JASPAR yes 22242914
chr2 238807314 238807335 IRF1 JASPAR yes 68304119
chr2 238807314 238807335 IRF1 JASPAR yes 82144570
chr2 238807319 238807332 ELF1 JASPAR yes 22242915
chr2 238807319 238807332 ELF1 JASPAR yes 68304120
chr2 238807319 238807332 ELF1 JASPAR yes 82144571
chr2 238807322 238807332 GABPA JASPAR yes 22242916
chr2 238807322 238807332 GABPA JASPAR yes 68304121
chr2 238807322 238807332 GABPA JASPAR yes 82144572
chr2 238807322 238807333 FLI1 JASPAR yes 22242917
chr2 238807322 238807333 FLI1 JASPAR yes 68304122
chr2 238807322 238807333 FLI1 JASPAR yes 82144573
chr2 238807359 238807370 TBX20 JASPAR yes 22242918
chr2 238807359 238807370 TBX20 JASPAR yes 68304123
chr2 238807359 238807370 TBX20 JASPAR yes 82144574
chr2 238807360 238807368 TBX15 JASPAR yes 22242919
chr2 238807360 238807368 TBX15 JASPAR yes 68304124
chr2 238807360 238807368 TBX15 JASPAR yes 82144575
chr2 238807360 238807371 E2F6 JASPAR yes 22242920
chr2 238807360 238807371 E2F6 JASPAR yes 68304125
chr2 238807360 238807371 E2F6 JASPAR yes 82144576
chr2 238807361 238807366 SP1 TRANSFAC yes 22242921
chr2 238807361 238807366 SP1 TRANSFAC yes 68304126
chr2 238807361 238807366 SP1 TRANSFAC yes 82144577
chr2 238807364 238807369 ETS2 TRANSFAC yes 22242922
chr2 238807364 238807369 ETS2 TRANSFAC yes 68304127
chr2 238807364 238807369 ETS2 TRANSFAC yes 82144578
chr2 238807388 238807403 TFAP2A JASPAR yes 22242923
chr2 238807388 238807403 TFAP2C JASPAR yes 22242924
chr2 238807388 238807403 TFAP2A JASPAR yes 68304128
chr2 238807388 238807403 TFAP2C JASPAR yes 68304129
chr2 238807388 238807403 TFAP2A JASPAR yes 82144579
chr2 238807388 238807403 TFAP2C JASPAR yes 82144580
chr2 238807391 238807402 EBF1 JASPAR yes 22242925
chr2 238807391 238807402 EBF1 JASPAR yes 68304130
chr2 238807391 238807402 EBF1 JASPAR yes 82144581
chr2 238807392 238807398 MZF1 JASPAR yes 22242926
chr2 238807392 238807398 MZF1 JASPAR yes 68304131
chr2 238807392 238807398 MZF1 JASPAR yes 82144582
chr2 238807393 238807402 TFAP2A JASPAR yes 22242927
chr2 238807393 238807402 TFAP2A JASPAR yes 68304132
chr2 238807393 238807402 TFAP2A JASPAR yes 82144583
chr2 238807419 238807437 ESR2 JASPAR yes 22242928
chr2 238807419 238807437 ESR2 JASPAR yes 68304133
chr2 238807419 238807437 ESR2 JASPAR yes 82144584
chr2 238807445 238807453 TBX5 JASPAR yes 22242929
chr2 238807445 238807453 TBX5 JASPAR yes 68304134
chr2 238807445 238807453 TBX5 JASPAR yes 82144585
chr2 238807445 238807454 ZEB1 JASPAR yes 22242930
chr2 238807445 238807454 ZEB1 JASPAR yes 68304135
chr2 238807445 238807454 ZEB1 JASPAR yes 82144586
chr2 238807447 238807456 SNAI2 JASPAR yes 22242931
chr2 238807447 238807456 SNAI2 JASPAR yes 68304136
chr2 238807447 238807456 SNAI2 JASPAR yes 82144587
chr2 238807448 238807453 USF2 TRANSFAC yes 22242932
chr2 238807448 238807453 USF2 TRANSFAC yes 68304137
chr2 238807448 238807453 USF2 TRANSFAC yes 82144588
chr2 238807479 238807493 TLX1 JASPAR yes 22242933
chr2 238807479 238807493 TLX1 JASPAR yes 68304138
chr2 238807479 238807493 TLX1 JASPAR yes 82144589
chr2 238807484 238807499 FOXA1 JASPAR yes 22242934
chr2 238807484 238807499 FOXA1 JASPAR yes 68304139
chr2 238807484 238807499 FOXA1 JASPAR yes 82144590
chr2 238807485 238807493 MEIS2 JASPAR yes 22242935
chr2 238807485 238807493 MEIS2 JASPAR yes 68304140
chr2 238807485 238807493 MEIS2 JASPAR yes 82144591
chr2 238807486 238807490 NFE TRANSFAC yes 22242936
chr2 238807486 238807490 NFE TRANSFAC yes 68304141
chr2 238807486 238807490 NFE TRANSFAC yes 82144592
chr2 238807486 238807493 MEIS1 JASPAR yes 22242937
chr2 238807486 238807493 MEIS1 JASPAR yes 68304142
chr2 238807486 238807493 MEIS1 JASPAR yes 82144593
chr2 238807490 238807504 SPIC JASPAR yes 22242938
chr2 238807490 238807504 SPIC JASPAR yes 68304143
chr2 238807490 238807504 SPIC JASPAR yes 82144594
chr2 238807491 238807504 ELF1 JASPAR yes 22242939
chr2 238807491 238807504 ELF1 JASPAR yes 68304144
chr2 238807491 238807504 ELF1 JASPAR yes 82144595
chr2 238807494 238807501 SPIB JASPAR yes 22242940
chr2 238807494 238807501 SPIB JASPAR yes 68304145
chr2 238807494 238807501 SPIB JASPAR yes 82144596
chr2 238807494 238807504 ETV6 JASPAR yes 22242941
chr2 238807494 238807504 GABPA JASPAR yes 22242942
chr2 238807494 238807504 ETV6 JASPAR yes 68304146
chr2 238807494 238807504 GABPA JASPAR yes 68304147
chr2 238807494 238807504 ETV6 JASPAR yes 82144597
chr2 238807494 238807504 GABPA JASPAR yes 82144598
chr2 238807494 238807505 ELK4 JASPAR yes 22242943
chr2 238807494 238807505 FLI1 JASPAR yes 22242944
chr2 238807494 238807505 ELK4 JASPAR yes 68304148
chr2 238807494 238807505 FLI1 JASPAR yes 68304149
chr2 238807494 238807505 ELK4 JASPAR yes 82144599
chr2 238807494 238807505 FLI1 JASPAR yes 82144600
chr2 238807495 238807503 EHF JASPAR yes 22242945
chr2 238807495 238807503 EHF JASPAR yes 68304150
chr2 238807495 238807503 EHF JASPAR yes 82144601
chr2 238807496 238807503 SPI1 JASPAR yes 22242946
chr2 238807496 238807503 SPI1 JASPAR yes 68304151
chr2 238807496 238807503 SPI1 JASPAR yes 82144602
chr2 238807509 238807518 NKX3-2 JASPAR yes 22242947
chr2 238807509 238807518 NKX3-2 JASPAR yes 68304152
chr2 238807509 238807518 NKX3-2 JASPAR yes 82144603
chr2 238807521 238807527 SP1 TRANSFAC yes 22242948
chr2 238807521 238807527 SP1 TRANSFAC yes 68304153
chr2 238807521 238807527 SP1 TRANSFAC yes 82144604
chr2 238807540 238807544 H4TF2 TRANSFAC yes 22242949
chr2 238807540 238807544 H4TF2 TRANSFAC yes 68304154
chr2 238807540 238807544 H4TF2 TRANSFAC yes 82144605
chr2 238807563 238807571 MGA JASPAR yes 22242950
chr2 238807563 238807571 TBX15 JASPAR yes 22242951
chr2 238807563 238807571 TBX1 JASPAR yes 22242952
chr2 238807563 238807571 TBX4 JASPAR yes 22242953
chr2 238807563 238807571 TBX5 JASPAR yes 22242954
chr2 238807563 238807571 MGA JASPAR yes 68304155
chr2 238807563 238807571 TBX15 JASPAR yes 68304156
chr2 238807563 238807571 TBX1 JASPAR yes 68304157
chr2 238807563 238807571 TBX4 JASPAR yes 68304158
chr2 238807563 238807571 TBX5 JASPAR yes 68304159
chr2 238807563 238807571 MGA JASPAR yes 82144606
chr2 238807563 238807571 TBX15 JASPAR yes 82144607
chr2 238807563 238807571 TBX1 JASPAR yes 82144608
chr2 238807563 238807571 TBX4 JASPAR yes 82144609
chr2 238807563 238807571 TBX5 JASPAR yes 82144610
chr2 238807590 238807599 RUNX2 JASPAR yes 22242955
chr2 238807590 238807599 RUNX2 JASPAR yes 68304160
chr2 238807590 238807599 RUNX2 JASPAR yes 82144611
chr2 238807590 238807600 RUNX3 JASPAR yes 22242956
chr2 238807590 238807600 RUNX3 JASPAR yes 68304161
chr2 238807590 238807600 RUNX3 JASPAR yes 82144612
chr2 238807632 238807647 SCRT1 JASPAR yes 22242957
chr2 238807632 238807647 SCRT1 JASPAR yes 82144613
chr2 238807634 238807647 SCRT2 JASPAR yes 22242958
chr2 238807634 238807647 SCRT2 JASPAR yes 82144614
SNP sites on vista35439[chr2:238807318-238807662]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr2 238807324 rs80216417 C G
ELF1 FLI1 GABPA IRF1
6483944
chr2 238807380 rs541053191 G A no 6483945
chr2 238807385 rs141872976 C A no 6483946
chr2 238807449 rs12999111 C T
SNAI2 TBX5 USF2 ZEB1
6483947
chr2 238807450 rs72980138 A G
SNAI2 TBX5 USF2 ZEB1
6483948
chr2 238807461 rs373467794 G A,T no 6483949
chr2 238807528 rs568489683 C T no 6483950
chr2 238807587 rs187764966 G A no 6483951
chr2 238807611 rs570512818 G A no 6483952
chr2 238807655 rs73094328 C T no 6483953
Genes possibly regulated by vista35439[chr2:238807318-238807662]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr2 238767536 238820756 + RAMP1 ENSG00000132329.6 238767536 0.95 1.0 3294 60218
chr2 238875469 238951236 + UBE2F ENSG00000184182.14 238875469 0.65 0.96 3295 32193
chr2 238875656 239008053 + UBE2F-SCLY ENSG00000258984.1 238875656 0.85 0.86 3296 32006
Expression level of Genes
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miRNAs possibly regulated by vista35439[chr2:238807318-238807662]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results