EnhancerDB
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  3. rs72980138[chr2:238807450]
Enhancers that have rs72980138[chr2:238807450]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238789822 238819991 enh19403
Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr2 238803368 238807597 vista1021
VISTA
chr2 238807318 238807662 vista35439
VISTA
Transcript factors that have rs72980138[chr2:238807450]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238807445 238807453 TBX5 JASPAR yes 22242929
chr2 238807445 238807453 TBX5 JASPAR yes 68304134
chr2 238807445 238807453 TBX5 JASPAR yes 82144585
chr2 238807445 238807454 ZEB1 JASPAR yes 22242930
chr2 238807445 238807454 ZEB1 JASPAR yes 68304135
chr2 238807445 238807454 ZEB1 JASPAR yes 82144586
chr2 238807447 238807456 SNAI2 JASPAR yes 22242931
chr2 238807447 238807456 SNAI2 JASPAR yes 68304136
chr2 238807447 238807456 SNAI2 JASPAR yes 82144587
chr2 238807448 238807453 USF2 TRANSFAC yes 22242932
chr2 238807448 238807453 USF2 TRANSFAC yes 68304137
chr2 238807448 238807453 USF2 TRANSFAC yes 82144588
Genes associated with rs72980138[chr2:238807450], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More