EnhancerDB
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  3. vista3856[chr1:171110631-171110996]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3856[chr1:171110631-171110996]
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Tissue distribution of vista3856
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Transcription factor that possibly regulate vista3856[chr1:171110631-171110996]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 171110859 171111273 CTCF UCSC Txn Factor no Conserved 107845262
chr1 171110622 171110632 NEUROG2 JASPAR yes 33062722
chr1 171110622 171110632 NEUROG2 JASPAR yes 118397260
chr1 171110622 171110634 TAL1 JASPAR yes 33062723
chr1 171110622 171110634 TAL1 JASPAR yes 118397261
chr1 171110630 171110639 HIC2 JASPAR yes 33062724
chr1 171110630 171110639 HIC2 JASPAR yes 118397262
chr1 171110634 171110646 NHLH1 JASPAR yes 33062725
chr1 171110634 171110646 NHLH1 JASPAR yes 118397263
chr1 171110635 171110645 MSC JASPAR yes 33062726
chr1 171110635 171110645 NHLH1 JASPAR yes 33062727
chr1 171110635 171110645 TFAP4 JASPAR yes 33062728
chr1 171110635 171110645 MSC JASPAR yes 118397264
chr1 171110635 171110645 NHLH1 JASPAR yes 118397265
chr1 171110635 171110645 TFAP4 JASPAR yes 118397266
chr1 171110639 171110654 LEF1 JASPAR yes 33062729
chr1 171110639 171110654 LEF1 JASPAR yes 118397267
chr1 171110686 171110700 RXRB JASPAR yes 33062730
chr1 171110686 171110700 RXRG JASPAR yes 33062731
chr1 171110686 171110700 RXRB JASPAR yes 118397268
chr1 171110686 171110700 RXRG JASPAR yes 118397269
chr1 171110696 171110706 RELA JASPAR yes 33062732
chr1 171110696 171110706 RELA JASPAR yes 118397270
chr1 171110700 171110708 FEV JASPAR yes 33062733
chr1 171110700 171110708 FEV JASPAR yes 118397271
chr1 171110718 171110733 RUNX2 JASPAR yes 33062734
chr1 171110718 171110733 RUNX2 JASPAR yes 118397272
chr1 171110719 171110728 RUNX2 JASPAR yes 33062735
chr1 171110719 171110728 RUNX2 JASPAR yes 118397273
chr1 171110722 171110730 TBX5 JASPAR yes 33062736
chr1 171110722 171110730 TBX5 JASPAR yes 118397274
chr1 171110731 171110742 FOXB1 JASPAR yes 33062737
chr1 171110731 171110742 FOXB1 JASPAR yes 118397275
chr1 171110733 171110738 MYB TRANSFAC yes 33062738
chr1 171110733 171110738 MYB TRANSFAC yes 118397276
chr1 171110737 171110748 CDX2 JASPAR yes 33062739
chr1 171110737 171110748 CDX2 JASPAR yes 118397277
chr1 171110738 171110749 HOXA10 JASPAR yes 33062740
chr1 171110738 171110749 HOXA10 JASPAR yes 118397278
chr1 171110739 171110748 CDX1 JASPAR yes 33062741
chr1 171110739 171110748 CDX1 JASPAR yes 118397279
chr1 171110739 171110749 HOXA13 JASPAR yes 33062742
chr1 171110739 171110749 HOXB13 JASPAR yes 33062743
chr1 171110739 171110749 HOXD13 JASPAR yes 33062744
chr1 171110739 171110749 HOXA13 JASPAR yes 118397280
chr1 171110739 171110749 HOXB13 JASPAR yes 118397281
chr1 171110739 171110749 HOXD13 JASPAR yes 118397282
chr1 171110755 171110770 TFAP2C JASPAR yes 33062745
chr1 171110755 171110770 TFAP2C JASPAR yes 118397283
chr1 171110756 171110767 EBF1 JASPAR yes 33062746
chr1 171110756 171110767 EBF1 JASPAR yes 118397284
chr1 171110774 171110782 GATA5 JASPAR yes 33062747
chr1 171110774 171110782 GATA5 JASPAR yes 118397285
chr1 171110786 171110790 YY1 TRANSFAC yes 33062748
chr1 171110786 171110790 YY1 TRANSFAC yes 118397286
chr1 171110797 171110809 FOXI1 JASPAR yes 33062749
chr1 171110797 171110809 FOXI1 JASPAR yes 118397287
chr1 171110810 171110828 NR3C1 JASPAR yes 33062750
chr1 171110810 171110828 NR3C1 JASPAR yes 118397288
chr1 171110824 171110830 ETS1 JASPAR yes 33062751
chr1 171110824 171110830 ETS1 JASPAR yes 118397289
chr1 171110871 171110887 NFYA JASPAR yes 33062752
chr1 171110871 171110887 NFYA JASPAR yes 118397290
chr1 171110873 171110877 TEAD2 TRANSFAC yes 33062753
chr1 171110873 171110877 TEAD2 TRANSFAC yes 118397291
chr1 171110873 171110883 HESX1 JASPAR yes 33062754
chr1 171110873 171110883 HESX1 JASPAR yes 118397292
chr1 171110874 171110882 DLX6 JASPAR yes 33062755
chr1 171110874 171110882 MSX2 JASPAR yes 33062756
chr1 171110874 171110882 DLX6 JASPAR yes 118397293
chr1 171110874 171110882 MSX2 JASPAR yes 118397294
chr1 171110877 171110891 NR2F1 JASPAR yes 33062757
chr1 171110877 171110891 NR2F1 JASPAR yes 118397295
chr1 171110882 171110895 NR2F1 JASPAR yes 33062758
chr1 171110882 171110895 NR2F1 JASPAR yes 118397296
chr1 171110883 171110891 CREB1 JASPAR yes 33062759
chr1 171110883 171110891 CREB1 JASPAR yes 118397297
chr1 171110883 171110898 HNF4G JASPAR yes 33062760
chr1 171110883 171110898 NR2C2 JASPAR yes 33062761
chr1 171110883 171110898 HNF4G JASPAR yes 118397298
chr1 171110883 171110898 NR2C2 JASPAR yes 118397299
chr1 171110884 171110898 RXRB JASPAR yes 33062762
chr1 171110884 171110898 RXRG JASPAR yes 33062763
chr1 171110884 171110898 RXRB JASPAR yes 118397300
chr1 171110884 171110898 RXRG JASPAR yes 118397301
chr1 171110884 171110899 HNF4A JASPAR yes 33062764
chr1 171110884 171110899 HNF4A JASPAR yes 118397302
chr1 171110886 171110890 ESR1 TRANSFAC yes 33062765
chr1 171110886 171110890 ESR1 TRANSFAC yes 118397303
chr1 171110893 171110897 LFA1 TRANSFAC yes 33062766
chr1 171110893 171110897 LFA1 TRANSFAC yes 118397304
chr1 171110916 171110928 YY1 JASPAR yes 33062767
chr1 171110916 171110928 YY1 JASPAR yes 118397305
chr1 171110919 171110929 NFATC3 JASPAR yes 33062768
chr1 171110919 171110929 NFATC3 JASPAR yes 118397306
chr1 171110941 171110951 NEUROG2 JASPAR yes 33062769
chr1 171110941 171110951 NEUROG2 JASPAR yes 118397307
chr1 171110947 171110962 STAT1 JASPAR yes 33062770
chr1 171110947 171110962 STAT1 JASPAR yes 118397308
chr1 171110949 171110960 STAT1 JASPAR yes 33062771
chr1 171110949 171110960 STAT3 JASPAR yes 33062772
chr1 171110949 171110960 STAT1 JASPAR yes 118397309
chr1 171110949 171110960 STAT3 JASPAR yes 118397310
chr1 171110967 171110977 TEAD1 JASPAR yes 33062773
chr1 171110967 171110977 TEAD1 JASPAR yes 118397311
chr1 171110974 171110984 HMBOX1 JASPAR yes 33062774
chr1 171110974 171110984 HMBOX1 JASPAR yes 118397312
chr1 171110976 171110979 MYB TRANSFAC yes 33062775
chr1 171110976 171110979 MYB TRANSFAC yes 118397313
SNP sites on vista3856[chr1:171110631-171110996]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 171110682 rs143463899 G C no 722368
chr1 171110721 rs7883579 A G
RUNX2
722369
chr1 171110769 rs116357279 C A
TFAP2C
722370
chr1 171110825 rs554780483 C T
ETS1 NR3C1
722371
chr1 171110835 rs150339832 C A no 722372
chr1 171110837 rs530040181 A G no 722373
chr1 171110869 rs2281006 G T
CTCF
722374
chr1 171110960 rs551244374 CAG C
CTCF STAT1 STAT3
722375
Genes possibly regulated by vista3856[chr1:171110631-171110996]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 171060018 171086959 + FMO3 ENSG00000007933.8 171060018 0.99 1.0 1561 49387
chr1 171106879 171130707 + FMO6P ENSG00000117507.4 171106879 0.96 0.0 1562 96248
chr1 171154347 171181822 + FMO2 ENSG00000094963.9 171154347 0.95 1.0 1563 56649
Expression level of Genes
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miRNAs possibly regulated by vista3856[chr1:171110631-171110996]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results