EnhancerDB
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  3. rs554780483[chr1:171110825]
Enhancers that have rs554780483[chr1:171110825]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 171106113 171114419 enh27230
Astrocyte Bone (Osteoblast) Lung Stomach Uterus Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Heart
chr1 171110631 171110996 vista3856
VISTA
Transcript factors that have rs554780483[chr1:171110825]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 171110536 171111922 TEF1 GTRD no Bone (Osteoblast) 21349614
chr1 171110536 171111922 TEF1 GTRD no Bone (Osteoblast) 107845258
chr1 171110536 171111922 TEF1 GTRD no Bone (Osteoblast) 107845259
chr1 171110768 171111119 ZNF143 GTRD no Epithelial (MCF-7) 107845260
chr1 171110771 171111277 ZNF143 GTRD no Epithelial (MCF-7) 107845261
chr1 171110810 171110828 NR3C1 JASPAR yes 33062750
chr1 171110810 171110828 NR3C1 JASPAR yes 118397288
chr1 171110824 171110830 ETS1 JASPAR yes 33062751
chr1 171110824 171110830 ETS1 JASPAR yes 118397289
Genes associated with rs554780483[chr1:171110825], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More