EnhancerDB
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  3. vista3868[chr1:171407653-171408026]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3868[chr1:171407653-171408026]
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Tissue distribution of vista3868
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Transcription factor that possibly regulate vista3868[chr1:171407653-171408026]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 171407547 171408150 FOS UCSC Txn Factor no Conserved 107845443
chr1 171407650 171407662 YY1 JASPAR yes 33081127
chr1 171407650 171407662 YY1 JASPAR yes 118397878
chr1 171407653 171407663 OLIG2 JASPAR yes 33081128
chr1 171407653 171407663 OLIG3 JASPAR yes 33081129
chr1 171407653 171407663 OLIG2 JASPAR yes 118397879
chr1 171407653 171407663 OLIG3 JASPAR yes 118397880
chr1 171407654 171407666 SRF JASPAR yes 33081130
chr1 171407654 171407666 SRF JASPAR yes 118397881
chr1 171407657 171407661 YY1 TRANSFAC yes 33081131
chr1 171407657 171407661 YY1 TRANSFAC yes 118397882
chr1 171407664 171407672 EHF JASPAR yes 33081132
chr1 171407664 171407672 EHF JASPAR yes 118397883
chr1 171407666 171407671 ETS2 TRANSFAC yes 33081133
chr1 171407666 171407671 ETS2 TRANSFAC yes 118397884
chr1 171407681 171407685 TEAD2 TRANSFAC yes 33081134
chr1 171407681 171407685 TEAD2 TRANSFAC yes 118397885
chr1 171407683 171407686 MYB TRANSFAC yes 33081135
chr1 171407683 171407686 MYB TRANSFAC yes 118397886
chr1 171407710 171407725 MAFK JASPAR yes 33081136
chr1 171407710 171407725 MAFK JASPAR yes 118397887
chr1 171407740 171407753 POU2F2 JASPAR yes 33081137
chr1 171407740 171407753 POU2F2 JASPAR yes 118397888
chr1 171407754 171407760 NFE2 TRANSFAC yes 33081138
chr1 171407754 171407760 NFE2 TRANSFAC yes 118397889
chr1 171407756 171407765 SP1 TRANSFAC yes 33081139
chr1 171407756 171407765 SP1 TRANSFAC yes 118397890
chr1 171407762 171407773 SPDEF JASPAR yes 33081140
chr1 171407762 171407773 SPDEF JASPAR yes 118397891
chr1 171407770 171407791 IRF1 JASPAR yes 33081141
chr1 171407770 171407791 IRF1 JASPAR yes 118397892
chr1 171407772 171407783 FOS JASPAR yes 33081142
chr1 171407772 171407783 FOSL1 JASPAR yes 33081143
chr1 171407772 171407783 FOS JASPAR yes 118397893
chr1 171407772 171407783 FOSL1 JASPAR yes 118397894
chr1 171407772 171407787 IRF9 JASPAR yes 33081144
chr1 171407772 171407787 IRF9 JASPAR yes 118397895
chr1 171407773 171407787 IRF8 JASPAR yes 33081145
chr1 171407773 171407787 IRF8 JASPAR yes 118397896
chr1 171407774 171407780 JUN TRANSFAC yes 33081146
chr1 171407774 171407780 JUN TRANSFAC yes 118397897
chr1 171407789 171407793 LFA1 TRANSFAC yes 33081147
chr1 171407789 171407793 LFA1 TRANSFAC yes 118397898
chr1 171407799 171407809 TFAP4 JASPAR yes 33081148
chr1 171407799 171407809 TFAP4 JASPAR yes 118397899
chr1 171407814 171407826 SRF JASPAR yes 33081149
chr1 171407814 171407826 SRF JASPAR yes 118397900
chr1 171407836 171407847 DMRT3 JASPAR yes 33081150
chr1 171407836 171407847 DMRT3 JASPAR yes 118397901
chr1 171407864 171407868 NFE TRANSFAC yes 33081151
chr1 171407864 171407868 NFE TRANSFAC yes 118397902
chr1 171407870 171407878 FOXO3 JASPAR yes 33081152
chr1 171407870 171407878 FOXO3 JASPAR yes 118397903
chr1 171407903 171407918 HNF4G JASPAR yes 33081153
chr1 171407903 171407918 HNF4G JASPAR yes 118397904
chr1 171407909 171407920 NFE2L2 JASPAR yes 33081154
chr1 171407909 171407920 NFE2L2 JASPAR yes 118397905
chr1 171407935 171407939 YY1 TRANSFAC yes 33081155
chr1 171407935 171407939 YY1 TRANSFAC yes 118397906
chr1 171407944 171407957 HSF1 JASPAR yes 33081156
chr1 171407944 171407957 HSF2 JASPAR yes 33081157
chr1 171407944 171407957 HSF4 JASPAR yes 33081158
chr1 171407944 171407957 HSF1 JASPAR yes 118397907
chr1 171407944 171407957 HSF2 JASPAR yes 118397908
chr1 171407944 171407957 HSF4 JASPAR yes 118397909
chr1 171407949 171407962 HSF2 JASPAR yes 33081159
chr1 171407949 171407962 HSF2 JASPAR yes 118397910
chr1 171407960 171407971 BATF JASPAR yes 33081160
chr1 171407960 171407971 BATF JASPAR yes 118397911
chr1 171407976 171407988 YY1 JASPAR yes 33081161
chr1 171407976 171407988 YY1 JASPAR yes 118397912
chr1 171407981 171407985 YY1 TRANSFAC yes 33081162
chr1 171407981 171407985 YY1 TRANSFAC yes 118397913
chr1 171407982 171408000 MAFF JASPAR yes 33081163
chr1 171407982 171408000 MAFF JASPAR yes 118397914
chr1 171407983 171407998 MAFK JASPAR yes 33081164
chr1 171407983 171407998 MAFK JASPAR yes 118397915
chr1 171407987 171407998 NRL JASPAR yes 33081165
chr1 171407987 171407998 NRL JASPAR yes 118397916
chr1 171407994 171407997 MYB TRANSFAC yes 33081166
chr1 171407994 171407997 MYB TRANSFAC yes 118397917
chr1 171408010 171408014 TEAD2 TRANSFAC yes 33081167
chr1 171408010 171408014 TEAD2 TRANSFAC yes 118397918
chr1 171408010 171408015 TBP TRANSFAC yes 33081168
chr1 171408010 171408015 TBP TRANSFAC yes 118397919
chr1 171408010 171408016 TFIID TRANSFAC yes 33081169
chr1 171408010 171408016 TFIID TRANSFAC yes 118397920
chr1 171408011 171408026 PRDM1 JASPAR yes 33081170
chr1 171408011 171408026 PRDM1 JASPAR yes 118397921
SNP sites on vista3868[chr1:171407653-171408026]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 171407712 rs34619319 A G
FOS MAFK
724322
chr1 171407719 rs10912996 G A
FOS MAFK
724323
chr1 171407761 rs2421812 C T
FOS SP1
724324
chr1 171407766 rs530304783 C T
FOS SPDEF
724325
chr1 171407951 rs16864488 T C
FOS HSF1 HSF2 HSF4
724326
Genes possibly regulated by vista3868[chr1:171407653-171408026]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 171454651 171562650 + PRRC2C ENSG00000117523.11 171454651 0.67 0.99 1566 53375
Expression level of Genes
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miRNAs possibly regulated by vista3868[chr1:171407653-171408026]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results