EnhancerDB
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  3. rs2421812[chr1:171407761]
Enhancers that have rs2421812[chr1:171407761]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 171385965 171412775 enh12367
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1)
chr1 171407653 171408026 vista3868
VISTA
Transcript factors that have rs2421812[chr1:171407761]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 171407484 171408034 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21349714
chr1 171407484 171408034 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107845440
chr1 171407541 171408005 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21349715
chr1 171407541 171408005 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107845441
chr1 171407542 171408018 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21349716
chr1 171407542 171408018 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107845442
chr1 171407547 171408150 FOS UCSC Txn Factor no Conserved 107845443
chr1 171407585 171407969 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21349717
chr1 171407585 171407969 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107845444
chr1 171407587 171407857 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21349718
chr1 171407587 171407857 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107845445
chr1 171407589 171407999 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21349719
chr1 171407589 171407999 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107845446
chr1 171407593 171407989 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21349720
chr1 171407593 171407989 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107845447
chr1 171407594 171407964 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21349721
chr1 171407594 171407964 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107845448
chr1 171407608 171407938 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21349722
chr1 171407608 171407938 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107845449
chr1 171407632 171407922 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21349723
chr1 171407632 171407922 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107845450
chr1 171407632 171407962 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21349724
chr1 171407632 171407962 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107845451
chr1 171407638 171407958 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21349725
chr1 171407638 171407958 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107845452
chr1 171407641 171407961 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21349726
chr1 171407641 171407961 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107845453
chr1 171407664 171408004 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21349727
chr1 171407664 171408004 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107845454
chr1 171407677 171407937 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21349728
chr1 171407677 171407937 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107845455
chr1 171407756 171407765 SP1 TRANSFAC yes 33081139
chr1 171407756 171407765 SP1 TRANSFAC yes 118397890
chr1 171407760 171408116 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21349729
chr1 171407760 171408116 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107845456
Genes associated with rs2421812[chr1:171407761], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More