EnhancerDB
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  3. vista3915[chr1:172828423-172828792]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3915[chr1:172828423-172828792]
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Tissue distribution of vista3915
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Transcription factor that possibly regulate vista3915[chr1:172828423-172828792]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 172828372 172828687 CEBPB UCSC Txn Factor no Conserved 107846196
chr1 172828395 172828656 EP300 UCSC Txn Factor no Conserved 107846199
chr1 172828410 172828426 SOX4 JASPAR yes 33157795
chr1 172828410 172828426 SOX4 JASPAR yes 118400041
chr1 172828422 172828433 HOXC13 JASPAR yes 33157797
chr1 172828422 172828433 HOXC13 JASPAR yes 118400042
chr1 172828425 172828429 TEAD2 TRANSFAC yes 33157798
chr1 172828425 172828429 TEAD2 TRANSFAC yes 118400043
chr1 172828425 172828430 TBP TRANSFAC yes 33157799
chr1 172828425 172828430 TBP TRANSFAC yes 118400044
chr1 172828425 172828431 TFIID TRANSFAC yes 33157800
chr1 172828425 172828431 TFIID TRANSFAC yes 118400045
chr1 172828434 172828449 RUNX2 JASPAR yes 33157801
chr1 172828434 172828449 RUNX2 JASPAR yes 118400046
chr1 172828437 172828448 RUNX1 JASPAR yes 33157802
chr1 172828437 172828448 RUNX1 JASPAR yes 118400047
chr1 172828438 172828448 RUNX3 JASPAR yes 33157803
chr1 172828438 172828448 RUNX3 JASPAR yes 118400048
chr1 172828457 172828463 NFIC JASPAR yes 33157804
chr1 172828457 172828463 NFIC JASPAR yes 118400049
chr1 172828460 172828471 DUX4 JASPAR yes 33157805
chr1 172828460 172828471 DUX4 JASPAR yes 118400050
chr1 172828462 172828467 ETS2 TRANSFAC yes 33157806
chr1 172828462 172828467 ETS2 TRANSFAC yes 118400051
chr1 172828469 172828477 HOXA5 JASPAR yes 33157807
chr1 172828469 172828477 HOXA5 JASPAR yes 118400052
chr1 172828471 172828479 DLX6 JASPAR yes 33157808
chr1 172828471 172828479 MSX1 JASPAR yes 33157809
chr1 172828471 172828479 DLX6 JASPAR yes 118400053
chr1 172828471 172828479 MSX1 JASPAR yes 118400054
chr1 172828480 172828484 YY1 TRANSFAC yes 33157810
chr1 172828480 172828484 YY1 TRANSFAC yes 118400055
chr1 172828485 172828489 YY1 TRANSFAC yes 33157811
chr1 172828485 172828489 YY1 TRANSFAC yes 118400056
chr1 172828486 172828497 CEBPB JASPAR yes 33157812
chr1 172828486 172828497 CEBPB JASPAR yes 118400057
chr1 172828488 172828496 FEV JASPAR yes 33157813
chr1 172828488 172828496 FEV JASPAR yes 118400058
chr1 172828503 172828516 DUXA JASPAR yes 33157814
chr1 172828503 172828516 DUXA JASPAR yes 118400059
chr1 172828504 172828515 DUX4 JASPAR yes 33157815
chr1 172828504 172828515 DUX4 JASPAR yes 118400060
chr1 172828509 172828523 STAT1 JASPAR yes 33157816
chr1 172828509 172828523 STAT1 JASPAR yes 118400061
chr1 172828523 172828531 FOXL1 JASPAR yes 33157817
chr1 172828523 172828531 FOXL1 JASPAR yes 118400062
chr1 172828534 172828544 TEAD1 JASPAR yes 33157818
chr1 172828534 172828544 TEAD4 JASPAR yes 33157819
chr1 172828534 172828544 TEAD1 JASPAR yes 118400063
chr1 172828534 172828544 TEAD4 JASPAR yes 118400064
chr1 172828534 172828550 SOX8 JASPAR yes 33157820
chr1 172828534 172828550 SOX8 JASPAR yes 118400065
chr1 172828559 172828572 ATF4 JASPAR yes 33157821
chr1 172828559 172828572 ATF4 JASPAR yes 118400066
chr1 172828560 172828573 JUN JASPAR yes 33157822
chr1 172828560 172828573 JUN JASPAR yes 118400067
chr1 172828560 172828578 MAFF JASPAR yes 33157823
chr1 172828560 172828578 MAFF JASPAR yes 118400068
chr1 172828561 172828576 MAFK JASPAR yes 33157824
chr1 172828561 172828576 MAFK JASPAR yes 118400069
chr1 172828565 172828576 NRL JASPAR yes 33157825
chr1 172828565 172828576 NRL JASPAR yes 118400070
chr1 172828570 172828574 YY1 TRANSFAC yes 33157826
chr1 172828570 172828574 YY1 TRANSFAC yes 118400071
chr1 172828574 172828580 TBP TRANSFAC yes 33157827
chr1 172828574 172828580 TBP TRANSFAC yes 118400072
chr1 172828579 172828593 SPI1 JASPAR yes 33157828
chr1 172828579 172828593 SPI1 JASPAR yes 118400073
chr1 172828579 172828595 SOX8 JASPAR yes 33157829
chr1 172828579 172828595 SOX8 JASPAR yes 118400074
chr1 172828593 172828605 POU2F1 JASPAR yes 33157830
chr1 172828593 172828605 POU2F1 JASPAR yes 118400075
chr1 172828595 172828605 NFATC3 JASPAR yes 33157831
chr1 172828595 172828605 NFATC3 JASPAR yes 118400076
chr1 172828597 172828604 NFATC2 JASPAR yes 33157832
chr1 172828597 172828604 NFATC2 JASPAR yes 118400077
chr1 172828610 172828618 FOXO3 JASPAR yes 33157833
chr1 172828610 172828618 FOXO3 JASPAR yes 118400078
chr1 172828615 172828627 PKNOX1 JASPAR yes 33157834
chr1 172828615 172828627 TGIF1 JASPAR yes 33157835
chr1 172828615 172828627 TGIF2 JASPAR yes 33157836
chr1 172828615 172828627 PKNOX1 JASPAR yes 118400079
chr1 172828615 172828627 TGIF1 JASPAR yes 118400080
chr1 172828615 172828627 TGIF2 JASPAR yes 118400081
chr1 172828619 172828637 ESR2 JASPAR yes 33157837
chr1 172828619 172828637 ESR2 JASPAR yes 118400082
chr1 172828621 172828636 ESR2 JASPAR yes 33157838
chr1 172828621 172828636 ESR2 JASPAR yes 118400083
chr1 172828621 172828641 ESR1 JASPAR yes 33157839
chr1 172828621 172828641 ESR1 JASPAR yes 118400084
chr1 172828622 172828626 ESR1 TRANSFAC yes 33157840
chr1 172828622 172828626 ESR1 TRANSFAC yes 118400085
chr1 172828635 172828649 SPIC JASPAR yes 33157841
chr1 172828635 172828649 SPIC JASPAR yes 118400086
chr1 172828643 172828656 POU3F3 JASPAR yes 33157842
chr1 172828643 172828656 POU3F3 JASPAR yes 118400087
chr1 172828653 172828663 HOXA13 JASPAR yes 33157843
chr1 172828653 172828663 HOXB13 JASPAR yes 33157844
chr1 172828653 172828663 HOXD13 JASPAR yes 33157845
chr1 172828653 172828663 HOXA13 JASPAR yes 118400088
chr1 172828653 172828663 HOXB13 JASPAR yes 118400089
chr1 172828653 172828663 HOXD13 JASPAR yes 118400090
chr1 172828653 172828664 HOXA10 JASPAR yes 33157846
chr1 172828653 172828664 HOXA10 JASPAR yes 118400091
chr1 172828654 172828663 CDX1 JASPAR yes 33157847
chr1 172828654 172828663 CDX1 JASPAR yes 118400092
chr1 172828654 172828665 CDX2 JASPAR yes 33157848
chr1 172828654 172828665 CDX2 JASPAR yes 118400093
chr1 172828674 172828686 FOXI1 JASPAR yes 33157849
chr1 172828674 172828686 FOXI1 JASPAR yes 118400094
chr1 172828677 172828681 YY1 TRANSFAC yes 33157850
chr1 172828677 172828681 YY1 TRANSFAC yes 118400095
chr1 172828679 172828688 SRY JASPAR yes 33157851
chr1 172828679 172828688 SRY JASPAR yes 118400096
chr1 172828688 172828701 ATF4 JASPAR yes 33157852
chr1 172828688 172828701 ATF4 JASPAR yes 118400097
chr1 172828688 172828703 TFAP2C JASPAR yes 33157853
chr1 172828688 172828703 TFAP2C JASPAR yes 118400098
chr1 172828690 172828705 TFAP2A JASPAR yes 33157854
chr1 172828690 172828705 TFAP2A JASPAR yes 118400099
chr1 172828690 172828708 NR3C1 JASPAR yes 33157855
chr1 172828690 172828708 NR3C1 JASPAR yes 118400100
chr1 172828691 172828702 TFAP2A JASPAR yes 33157856
chr1 172828691 172828702 TFAP2B JASPAR yes 33157857
chr1 172828691 172828702 TFAP2C JASPAR yes 33157858
chr1 172828691 172828702 TFAP2A JASPAR yes 118400101
chr1 172828691 172828702 TFAP2B JASPAR yes 118400102
chr1 172828691 172828702 TFAP2C JASPAR yes 118400103
chr1 172828699 172828710 FOXP2 JASPAR yes 33157859
chr1 172828699 172828710 FOXP2 JASPAR yes 118400104
chr1 172828701 172828709 FOXO3 JASPAR yes 33157860
chr1 172828701 172828709 FOXO3 JASPAR yes 118400105
chr1 172828702 172828715 EOMES JASPAR yes 33157861
chr1 172828702 172828715 EOMES JASPAR yes 118400106
chr1 172828707 172828722 SOX21 JASPAR yes 33157862
chr1 172828707 172828722 SOX21 JASPAR yes 118400107
chr1 172828707 172828723 SOX4 JASPAR yes 33157863
chr1 172828707 172828723 SOX4 JASPAR yes 118400108
chr1 172828712 172828722 MYF6 JASPAR yes 33157864
chr1 172828712 172828722 MYF6 JASPAR yes 118400109
chr1 172828730 172828741 NFIL3 JASPAR yes 33157865
chr1 172828730 172828741 NFIL3 JASPAR yes 118400110
chr1 172828743 172828751 FOXC1 JASPAR yes 33157866
chr1 172828743 172828751 FOXC1 JASPAR yes 118400111
chr1 172828746 172828761 RUNX2 JASPAR yes 33157867
chr1 172828746 172828761 RUNX2 JASPAR yes 118400112
chr1 172828768 172828781 POU3F3 JASPAR yes 33157868
chr1 172828768 172828781 POU3F3 JASPAR yes 118400113
chr1 172828768 172828782 POU1F1 JASPAR yes 33157869
chr1 172828768 172828782 POU1F1 JASPAR yes 118400114
chr1 172828769 172828781 POU3F1 JASPAR yes 33157870
chr1 172828769 172828781 POU3F1 JASPAR yes 118400115
chr1 172828771 172828779 FOXG1 JASPAR yes 33157871
chr1 172828771 172828779 FOXG1 JASPAR yes 118400116
chr1 172828772 172828782 HOXA13 JASPAR yes 33157872
chr1 172828772 172828782 HOXA13 JASPAR yes 118400117
chr1 172828772 172828783 HOXA10 JASPAR yes 33157873
chr1 172828772 172828783 HOXA10 JASPAR yes 118400118
chr1 172828773 172828782 CDX1 JASPAR yes 33157874
chr1 172828773 172828782 CDX1 JASPAR yes 118400119
chr1 172828773 172828784 CDX2 JASPAR yes 33157875
chr1 172828773 172828784 CDX2 JASPAR yes 118400120
chr1 172828782 172828788 NFE2 TRANSFAC yes 33157876
chr1 172828782 172828788 NFE2 TRANSFAC yes 118400121
chr1 172828783 172828801 SRF JASPAR yes 33157877
chr1 172828783 172828801 SRF JASPAR yes 118400122
SNP sites on vista3915[chr1:172828423-172828792]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 172828480 rs17371133 A C
CEBPB EP300 YY1
731388
chr1 172828782 rs142262833 C T
CDX1 CDX2 HOXA10 HOXA13 NFE2 POU1F1
731389
Genes possibly regulated by vista3915[chr1:172828423-172828792]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista3915[chr1:172828423-172828792]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results