EnhancerDB
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  3. rs142262833[chr1:172828782]
Enhancers that have rs142262833[chr1:172828782]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172826285 172832604 enh27244
Skin (Keratinocyte) Prostate (PC-3) Astrocyte Bone (Osteoblast) Colon (HCT116) Lung (PC-9)
chr1 172828423 172828792 vista3915
VISTA
Transcript factors that have rs142262833[chr1:172828782]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172828342 172828918 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107846193
chr1 172828412 172828788 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107846201
chr1 172828768 172828782 POU1F1 JASPAR yes 33157869
chr1 172828768 172828782 POU1F1 JASPAR yes 118400114
chr1 172828772 172828782 HOXA13 JASPAR yes 33157872
chr1 172828772 172828782 HOXA13 JASPAR yes 118400117
chr1 172828772 172828783 HOXA10 JASPAR yes 33157873
chr1 172828772 172828783 HOXA10 JASPAR yes 118400118
chr1 172828773 172828782 CDX1 JASPAR yes 33157874
chr1 172828773 172828782 CDX1 JASPAR yes 118400119
chr1 172828773 172828784 CDX2 JASPAR yes 33157875
chr1 172828773 172828784 CDX2 JASPAR yes 118400120
chr1 172828782 172828788 NFE2 TRANSFAC yes 33157876
chr1 172828782 172828788 NFE2 TRANSFAC yes 118400121
Genes associated with rs142262833[chr1:172828782], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More