EnhancerDB
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  3. vista3927[chr1:172888696-172888994]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3927[chr1:172888696-172888994]
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Tissue distribution of vista3927
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Transcription factor that possibly regulate vista3927[chr1:172888696-172888994]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 172888717 172888728 HOXA10 JASPAR yes 33166409
chr1 172888717 172888728 HOXA10 JASPAR yes 118400687
chr1 172888718 172888728 HOXB13 JASPAR yes 33166410
chr1 172888718 172888728 HOXD13 JASPAR yes 33166411
chr1 172888718 172888728 HOXB13 JASPAR yes 118400688
chr1 172888718 172888728 HOXD13 JASPAR yes 118400689
chr1 172888722 172888728 TBP TRANSFAC yes 33166412
chr1 172888722 172888728 TBP TRANSFAC yes 118400690
chr1 172888743 172888764 ZNF263 JASPAR yes 33166413
chr1 172888743 172888764 ZNF263 JASPAR yes 118400691
chr1 172888765 172888779 GATA2 JASPAR yes 33166414
chr1 172888765 172888779 GATA2 JASPAR yes 118400692
chr1 172888769 172888777 GATA5 JASPAR yes 33166415
chr1 172888769 172888777 GATA5 JASPAR yes 118400693
chr1 172888775 172888791 POU4F2 JASPAR yes 33166416
chr1 172888775 172888791 POU4F3 JASPAR yes 33166417
chr1 172888775 172888791 POU4F2 JASPAR yes 118400694
chr1 172888775 172888791 POU4F3 JASPAR yes 118400695
chr1 172888779 172888793 ONECUT2 JASPAR yes 33166418
chr1 172888779 172888793 ONECUT3 JASPAR yes 33166419
chr1 172888779 172888793 ONECUT2 JASPAR yes 118400696
chr1 172888779 172888793 ONECUT3 JASPAR yes 118400697
chr1 172888782 172888792 MEOX2 JASPAR yes 33166420
chr1 172888782 172888792 MEOX2 JASPAR yes 118400698
chr1 172888783 172888796 DUXA JASPAR yes 33166421
chr1 172888783 172888796 DUXA JASPAR yes 118400699
chr1 172888784 172888795 DUX4 JASPAR yes 33166422
chr1 172888784 172888795 DUX4 JASPAR yes 118400700
chr1 172888796 172888801 GATA2 JASPAR yes 33166423
chr1 172888796 172888801 GATA2 JASPAR yes 118400701
chr1 172888797 172888803 ZNF354C JASPAR yes 33166424
chr1 172888797 172888803 ZNF354C JASPAR yes 118400702
chr1 172888833 172888848 LEF1 JASPAR yes 33166425
chr1 172888833 172888848 LEF1 JASPAR yes 118400703
chr1 172888851 172888855 H1TF2 TRANSFAC yes 33166426
chr1 172888851 172888855 NFE TRANSFAC yes 33166427
chr1 172888851 172888855 SRF TRANSFAC yes 33166428
chr1 172888851 172888855 H1TF2 TRANSFAC yes 118400704
chr1 172888851 172888855 NFE TRANSFAC yes 118400705
chr1 172888851 172888855 SRF TRANSFAC yes 118400706
chr1 172888876 172888886 SREBF1 JASPAR yes 33166429
chr1 172888876 172888886 SREBF1 JASPAR yes 118400707
chr1 172888882 172888893 BATF JASPAR yes 33166430
chr1 172888882 172888893 BATF JASPAR yes 118400708
chr1 172888919 172888936 BCL6B JASPAR yes 33166431
chr1 172888919 172888936 BCL6B JASPAR yes 118400709
chr1 172888947 172888962 LEF1 JASPAR yes 33166432
chr1 172888947 172888962 LEF1 JASPAR yes 118400710
chr1 172888969 172888977 FOXO3 JASPAR yes 33166433
chr1 172888969 172888977 FOXO3 JASPAR yes 118400711
chr1 172888974 172888978 H1TF2 TRANSFAC yes 33166434
chr1 172888974 172888978 NFE TRANSFAC yes 33166435
chr1 172888974 172888978 SRF TRANSFAC yes 33166436
chr1 172888974 172888978 H1TF2 TRANSFAC yes 118400712
chr1 172888974 172888978 NFE TRANSFAC yes 118400713
chr1 172888974 172888978 SRF TRANSFAC yes 118400714
chr1 172888983 172889004 ZNF263 JASPAR yes 33166437
chr1 172888983 172889004 ZNF263 JASPAR yes 118400715
chr1 172888992 172888995 MYB TRANSFAC yes 33166438
chr1 172888992 172888995 MYB TRANSFAC yes 118400716
SNP sites on vista3927[chr1:172888696-172888994]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 172888806 rs61828388 G A no 731942
chr1 172888851 rs146496572 C T
H1TF2 NFE SRF
731943
Genes possibly regulated by vista3927[chr1:172888696-172888994]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista3927[chr1:172888696-172888994]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results