EnhancerDB
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  3. rs146496572[chr1:172888851]
Enhancers that have rs146496572[chr1:172888851]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172860479 172890491 enh12377
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Epithelial (MCF-7)
chr1 172888696 172888994 vista3927
VISTA
Transcript factors that have rs146496572[chr1:172888851]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172888851 172888855 H1TF2 TRANSFAC yes 33166426
chr1 172888851 172888855 NFE TRANSFAC yes 33166427
chr1 172888851 172888855 SRF TRANSFAC yes 33166428
chr1 172888851 172888855 H1TF2 TRANSFAC yes 118400704
chr1 172888851 172888855 NFE TRANSFAC yes 118400705
chr1 172888851 172888855 SRF TRANSFAC yes 118400706
Genes associated with rs146496572[chr1:172888851], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More