EnhancerDB
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  3. vista3944[chr1:173370600-173370810]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3944[chr1:173370600-173370810]
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Tissue distribution of vista3944
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Transcription factor that possibly regulate vista3944[chr1:173370600-173370810]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 173370601 173370607 MZF1 JASPAR yes 33195208
chr1 173370601 173370607 MZF1 JASPAR yes 118401542
chr1 173370604 173370608 H1TF2 TRANSFAC yes 33195209
chr1 173370604 173370608 NFE TRANSFAC yes 33195210
chr1 173370604 173370608 SRF TRANSFAC yes 33195211
chr1 173370604 173370608 H1TF2 TRANSFAC yes 118401543
chr1 173370604 173370608 NFE TRANSFAC yes 118401544
chr1 173370604 173370608 SRF TRANSFAC yes 118401545
chr1 173370638 173370651 POU2F2 JASPAR yes 33195212
chr1 173370638 173370651 POU2F2 JASPAR yes 118401546
chr1 173370655 173370665 NFATC3 JASPAR yes 33195213
chr1 173370655 173370665 NFATC3 JASPAR yes 118401547
chr1 173370657 173370664 NFATC2 JASPAR yes 33195214
chr1 173370657 173370664 NFATC2 JASPAR yes 118401548
chr1 173370658 173370672 SPI1 JASPAR yes 33195215
chr1 173370658 173370672 SPIC JASPAR yes 33195216
chr1 173370658 173370672 SPI1 JASPAR yes 118401549
chr1 173370658 173370672 SPIC JASPAR yes 118401550
chr1 173370659 173370672 ELF1 JASPAR yes 33195217
chr1 173370659 173370672 ELF1 JASPAR yes 118401551
chr1 173370663 173370668 ETS2 TRANSFAC yes 33195218
chr1 173370663 173370668 ETS2 TRANSFAC yes 118401552
chr1 173370682 173370697 RFX5 JASPAR yes 33195219
chr1 173370682 173370697 RFX5 JASPAR yes 118401553
chr1 173370689 173370699 NKX2-3 JASPAR yes 33195220
chr1 173370689 173370699 NKX2-3 JASPAR yes 118401554
chr1 173370690 173370699 NKX2-8 JASPAR yes 33195221
chr1 173370690 173370699 NKX2-8 JASPAR yes 118401555
chr1 173370701 173370713 TAL1 JASPAR yes 33195222
chr1 173370701 173370713 TAL1 JASPAR yes 118401556
chr1 173370702 173370715 ZBTB18 JASPAR yes 33195223
chr1 173370702 173370715 ZBTB18 JASPAR yes 118401557
chr1 173370703 173370713 MYF6 JASPAR yes 33195224
chr1 173370703 173370713 NEUROG2 JASPAR yes 33195225
chr1 173370703 173370713 OLIG1 JASPAR yes 33195226
chr1 173370703 173370713 OLIG3 JASPAR yes 33195227
chr1 173370703 173370713 MYF6 JASPAR yes 118401558
chr1 173370703 173370713 NEUROG2 JASPAR yes 118401559
chr1 173370703 173370713 OLIG1 JASPAR yes 118401560
chr1 173370703 173370713 OLIG3 JASPAR yes 118401561
chr1 173370703 173370715 TAL1 JASPAR yes 33195228
chr1 173370703 173370715 TAL1 JASPAR yes 118401562
chr1 173370706 173370721 FOXP1 JASPAR yes 33195229
chr1 173370706 173370721 FOXP1 JASPAR yes 118401563
chr1 173370707 173370718 FOXP2 JASPAR yes 33195230
chr1 173370707 173370718 FOXP2 JASPAR yes 118401564
chr1 173370717 173370728 ESRRA JASPAR yes 33195231
chr1 173370717 173370728 ESRRA JASPAR yes 118401565
chr1 173370730 173370737 JUN TRANSFAC yes 33195232
chr1 173370730 173370737 SP1 TRANSFAC yes 33195233
chr1 173370730 173370737 JUN TRANSFAC yes 118401566
chr1 173370730 173370737 SP1 TRANSFAC yes 118401567
chr1 173370749 173370755 MZF1 JASPAR yes 33195234
chr1 173370749 173370755 MZF1 JASPAR yes 118401568
chr1 173370792 173370802 RELA JASPAR yes 33195235
chr1 173370792 173370802 RELA JASPAR yes 118401569
chr1 173370803 173370808 GATA1 TRANSFAC yes 33195236
chr1 173370803 173370808 GATA1 TRANSFAC yes 118401570
SNP sites on vista3944[chr1:173370600-173370810]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 173370600 rs114895577 C G no 734516
chr1 173370650 rs7555197 C A
POU2F2
734517
chr1 173370726 rs149356043 T C
ESRRA
734518
Genes possibly regulated by vista3944[chr1:173370600-173370810]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 173446405 173457946 + PRDX6 ENSG00000117592.8 173446405 0.68 0.99 1577 24405
Expression level of Genes
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miRNAs possibly regulated by vista3944[chr1:173370600-173370810]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results