EnhancerDB
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  3. rs7555197[chr1:173370650]
Enhancers that have rs7555197[chr1:173370650]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 173367664 173402717 enh734
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673)
chr1 173370600 173370810 vista3944
VISTA
Transcript factors that have rs7555197[chr1:173370650]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 173370493 173371057 ZNF274 GTRD no Bone Marrow (K562) 21351239
chr1 173370493 173371057 ZNF274 GTRD no Bone Marrow (K562) 107846632
chr1 173370521 173371038 ZNF274 GTRD no Bone Marrow (K562) 21351240
chr1 173370521 173371038 ZNF274 GTRD no Bone Marrow (K562) 107846633
chr1 173370527 173371126 ZNF274 GTRD no Bone Marrow (K562) 21351241
chr1 173370527 173371126 ZNF274 GTRD no Bone Marrow (K562) 107846634
chr1 173370638 173370651 POU2F2 JASPAR yes 33195212
chr1 173370638 173370651 POU2F2 JASPAR yes 118401546
Genes associated with rs7555197[chr1:173370650], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More