EnhancerDB
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  3. vista3946[chr1:173382392-173382663]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3946[chr1:173382392-173382663]
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Tissue distribution of vista3946
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Transcription factor that possibly regulate vista3946[chr1:173382392-173382663]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 173382173 173383663 POLR2A UCSC Txn Factor no Conserved 107846681
chr1 173382388 173382399 NFE2L2 JASPAR yes 33197050
chr1 173382388 173382399 NFE2L2 JASPAR yes 118401628
chr1 173382395 173382398 MYB TRANSFAC yes 33197051
chr1 173382395 173382398 MYB TRANSFAC yes 118401629
chr1 173382413 173382417 H1TF2 TRANSFAC yes 33197052
chr1 173382413 173382417 NFE TRANSFAC yes 33197053
chr1 173382413 173382417 SRF TRANSFAC yes 33197054
chr1 173382413 173382417 H1TF2 TRANSFAC yes 118401630
chr1 173382413 173382417 NFE TRANSFAC yes 118401631
chr1 173382413 173382417 SRF TRANSFAC yes 118401632
chr1 173382415 173382430 LEF1 JASPAR yes 33197055
chr1 173382415 173382430 LEF1 JASPAR yes 118401633
chr1 173382416 173382430 TCF7L2 JASPAR yes 33197056
chr1 173382416 173382430 TCF7L2 JASPAR yes 118401634
chr1 173382419 173382425 LEF1 TRANSFAC yes 33197057
chr1 173382419 173382425 SOX10 JASPAR yes 33197058
chr1 173382419 173382425 LEF1 TRANSFAC yes 118401635
chr1 173382419 173382425 SOX10 JASPAR yes 118401636
chr1 173382434 173382454 PPARG JASPAR yes 33197059
chr1 173382434 173382454 PPARG JASPAR yes 118401637
chr1 173382448 173382458 ERF JASPAR yes 33197060
chr1 173382448 173382458 ERF JASPAR yes 118401638
chr1 173382449 173382456 SPI1 JASPAR yes 33197061
chr1 173382449 173382456 SPI1 JASPAR yes 118401639
chr1 173382453 173382469 GLIS1 JASPAR yes 33197062
chr1 173382453 173382469 GLIS1 JASPAR yes 118401640
chr1 173382454 173382468 GLIS2 JASPAR yes 33197063
chr1 173382454 173382468 GLIS3 JASPAR yes 33197064
chr1 173382454 173382468 GLIS2 JASPAR yes 118401641
chr1 173382454 173382468 GLIS3 JASPAR yes 118401642
chr1 173382482 173382487 GATA1 TRANSFAC yes 33197065
chr1 173382482 173382487 GATA1 TRANSFAC yes 118401643
chr1 173382511 173382523 TAL1 JASPAR yes 33197066
chr1 173382511 173382523 TAL1 JASPAR yes 118401644
chr1 173382522 173382526 YY1 TRANSFAC yes 33197067
chr1 173382522 173382526 YY1 TRANSFAC yes 118401645
chr1 173382536 173382547 HOXA10 JASPAR yes 33197068
chr1 173382536 173382547 HOXA10 JASPAR yes 118401646
chr1 173382537 173382547 GSX2 JASPAR yes 33197069
chr1 173382537 173382547 MNX1 JASPAR yes 33197070
chr1 173382537 173382547 GSX2 JASPAR yes 118401647
chr1 173382537 173382547 MNX1 JASPAR yes 118401648
chr1 173382538 173382546 BARX1 JASPAR yes 33197071
chr1 173382538 173382546 BARX1 JASPAR yes 118401649
chr1 173382538 173382547 VENTX JASPAR yes 33197072
chr1 173382538 173382547 VENTX JASPAR yes 118401650
chr1 173382547 173382552 TFAP2A TRANSFAC yes 33197073
chr1 173382547 173382552 TFAP2A TRANSFAC yes 118401651
chr1 173382547 173382553 MZF1 JASPAR yes 33197074
chr1 173382547 173382553 MZF1 JASPAR yes 118401652
chr1 173382548 173382559 NFKB1 JASPAR yes 33197075
chr1 173382548 173382559 NFKB1 JASPAR yes 118401653
chr1 173382549 173382554 ETS2 TRANSFAC yes 33197076
chr1 173382549 173382554 ETS2 TRANSFAC yes 118401654
chr1 173382549 173382559 NFKB1 JASPAR yes 33197077
chr1 173382549 173382559 REL JASPAR yes 33197078
chr1 173382549 173382559 NFKB1 JASPAR yes 118401655
chr1 173382549 173382559 REL JASPAR yes 118401656
chr1 173382549 173382560 NFKB1 JASPAR yes 33197079
chr1 173382549 173382560 NFKB1 JASPAR yes 118401657
chr1 173382550 173382560 NFKB1 JASPAR yes 33197080
chr1 173382550 173382560 REL JASPAR yes 33197081
chr1 173382550 173382560 NFKB1 JASPAR yes 118401658
chr1 173382550 173382560 REL JASPAR yes 118401659
chr1 173382550 173382561 NFKB1 JASPAR yes 33197082
chr1 173382550 173382561 NFKB1 JASPAR yes 118401660
chr1 173382556 173382562 MZF1 JASPAR yes 33197083
chr1 173382556 173382562 MZF1 JASPAR yes 118401661
chr1 173382573 173382580 MEIS1 JASPAR yes 33197084
chr1 173382573 173382580 MEIS1 JASPAR yes 118401662
chr1 173382573 173382581 MEIS2 JASPAR yes 33197085
chr1 173382573 173382581 MEIS3 JASPAR yes 33197086
chr1 173382573 173382581 MEIS2 JASPAR yes 118401663
chr1 173382573 173382581 MEIS3 JASPAR yes 118401664
chr1 173382574 173382586 TGIF2 JASPAR yes 33197087
chr1 173382574 173382586 TGIF2 JASPAR yes 118401665
chr1 173382609 173382625 SOX4 JASPAR yes 33197088
chr1 173382609 173382625 SOX4 JASPAR yes 118401666
chr1 173382610 173382625 SOX21 JASPAR yes 33197089
chr1 173382610 173382625 SOX21 JASPAR yes 118401667
SNP sites on vista3946[chr1:173382392-173382663]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 173382486 rs552786825 T C
GATA1 POLR2A
734673
chr1 173382510 rs143593707 T C
POLR2A
734674
chr1 173382529 rs77808769 G A
POLR2A
734675
Genes possibly regulated by vista3946[chr1:173382392-173382663]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 173446405 173457946 + PRDX6 ENSG00000117592.8 173446405 0.68 0.99 1577 36258
Expression level of Genes
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miRNAs possibly regulated by vista3946[chr1:173382392-173382663]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results