EnhancerDB
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  3. rs552786825[chr1:173382486]
Enhancers that have rs552786825[chr1:173382486]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 173367664 173402717 enh734
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673)
chr1 173382392 173382663 vista3946
VISTA
Transcript factors that have rs552786825[chr1:173382486]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 173381948 173382538 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846679
chr1 173382173 173383654 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846680
chr1 173382173 173383663 POLR2A UCSC Txn Factor no Conserved 107846681
chr1 173382205 173382615 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846682
chr1 173382255 173382691 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846683
chr1 173382281 173382691 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846684
chr1 173382318 173382594 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846685
chr1 173382338 173382718 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846686
chr1 173382351 173382735 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846687
chr1 173382374 173382634 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846688
chr1 173382437 173382817 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846689
chr1 173382443 173382723 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846690
chr1 173382451 173382631 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846691
chr1 173382470 173382800 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846692
chr1 173382482 173382487 GATA1 TRANSFAC yes 33197065
chr1 173382482 173382487 GATA1 TRANSFAC yes 118401643
Genes associated with rs552786825[chr1:173382486], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More