EnhancerDB
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  3. vista3947[chr1:173384654-173384941]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3947[chr1:173384654-173384941]
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Tissue distribution of vista3947
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Transcription factor that possibly regulate vista3947[chr1:173384654-173384941]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 173384649 173384959 POU2F2 UCSC Txn Factor no Conserved 107846706
chr1 173384673 173384953 PAX5 UCSC Txn Factor no Conserved 107846707
chr1 173384746 173384956 BATF UCSC Txn Factor no Conserved 107846723
chr1 173384661 173384676 HNF4G JASPAR yes 33197347
chr1 173384661 173384676 HNF4G JASPAR yes 118401668
chr1 173384661 173384681 PPARG JASPAR yes 33197348
chr1 173384661 173384681 PPARG JASPAR yes 118401669
chr1 173384662 173384677 HNF4A JASPAR yes 33197349
chr1 173384662 173384677 HNF4A JASPAR yes 118401670
chr1 173384684 173384690 YY1 JASPAR yes 33197350
chr1 173384684 173384690 YY1 JASPAR yes 118401671
chr1 173384684 173384699 TFAP2A JASPAR yes 33197351
chr1 173384684 173384699 TFAP2C JASPAR yes 33197352
chr1 173384684 173384699 TFAP2A JASPAR yes 118401672
chr1 173384684 173384699 TFAP2C JASPAR yes 118401673
chr1 173384685 173384695 SREBF1 JASPAR yes 33197353
chr1 173384685 173384695 SREBF1 JASPAR yes 118401674
chr1 173384686 173384701 TFAP2A JASPAR yes 33197354
chr1 173384686 173384701 TFAP2C JASPAR yes 33197355
chr1 173384686 173384701 TFAP2A JASPAR yes 118401675
chr1 173384686 173384701 TFAP2C JASPAR yes 118401676
chr1 173384694 173384709 HNF4A JASPAR yes 33197356
chr1 173384694 173384709 HNF4A JASPAR yes 118401677
chr1 173384700 173384715 HNF4G JASPAR yes 33197357
chr1 173384700 173384715 HNF4G JASPAR yes 118401678
chr1 173384701 173384716 HNF4A JASPAR yes 33197358
chr1 173384701 173384716 HNF4A JASPAR yes 118401679
chr1 173384710 173384714 LFA1 TRANSFAC yes 33197359
chr1 173384710 173384714 LFA1 TRANSFAC yes 118401680
chr1 173384711 173384732 REST JASPAR yes 33197360
chr1 173384711 173384732 REST JASPAR yes 118401681
chr1 173384712 173384731 REST JASPAR yes 33197361
chr1 173384712 173384731 REST JASPAR yes 118401682
chr1 173384717 173384727 NFIA JASPAR yes 33197362
chr1 173384717 173384727 NFIA JASPAR yes 118401683
chr1 173384719 173384725 NFIC JASPAR yes 33197363
chr1 173384719 173384725 NFIC JASPAR yes 118401684
chr1 173384719 173384733 TLX1 JASPAR yes 33197364
chr1 173384719 173384733 TLX1 JASPAR yes 118401685
chr1 173384720 173384734 TLX1 JASPAR yes 33197365
chr1 173384720 173384734 TLX1 JASPAR yes 118401686
chr1 173384733 173384749 SOX8 JASPAR yes 33197366
chr1 173384733 173384749 SOX8 JASPAR yes 118401687
chr1 173384739 173384744 GATA2 JASPAR yes 33197367
chr1 173384739 173384744 GATA2 JASPAR yes 118401688
chr1 173384740 173384750 EVX1 JASPAR yes 33197368
chr1 173384740 173384750 EVX2 JASPAR yes 33197369
chr1 173384740 173384750 EVX1 JASPAR yes 118401689
chr1 173384740 173384750 EVX2 JASPAR yes 118401690
chr1 173384746 173384751 GATA2 JASPAR yes 33197370
chr1 173384746 173384751 GATA2 JASPAR yes 118401691
chr1 173384784 173384797 POU3F3 JASPAR yes 33197371
chr1 173384784 173384797 POU3F3 JASPAR yes 118401692
chr1 173384784 173384798 POU1F1 JASPAR yes 33197372
chr1 173384784 173384798 POU1F1 JASPAR yes 118401693
chr1 173384785 173384798 POU2F2 JASPAR yes 33197373
chr1 173384785 173384798 POU2F2 JASPAR yes 118401694
chr1 173384799 173384802 MYB TRANSFAC yes 33197374
chr1 173384799 173384802 MYB TRANSFAC yes 118401695
chr1 173384841 173384844 MYB TRANSFAC yes 33197375
chr1 173384841 173384844 MYB TRANSFAC yes 118401696
chr1 173384841 173384850 SOX9 JASPAR yes 33197376
chr1 173384841 173384850 SOX9 JASPAR yes 118401697
chr1 173384855 173384867 PKNOX2 JASPAR yes 33197377
chr1 173384855 173384867 PKNOX2 JASPAR yes 118401698
chr1 173384856 173384865 SNAI2 JASPAR yes 33197378
chr1 173384856 173384865 SNAI2 JASPAR yes 118401699
chr1 173384856 173384866 ID4 JASPAR yes 33197379
chr1 173384856 173384866 TCF3 JASPAR yes 33197380
chr1 173384856 173384866 TCF4 JASPAR yes 33197381
chr1 173384856 173384866 ID4 JASPAR yes 118401700
chr1 173384856 173384866 TCF3 JASPAR yes 118401701
chr1 173384856 173384866 TCF4 JASPAR yes 118401702
chr1 173384866 173384878 TEAD1 JASPAR yes 33197382
chr1 173384866 173384878 TEAD1 JASPAR yes 118401703
chr1 173384870 173384891 IRF1 JASPAR yes 33197383
chr1 173384870 173384891 IRF1 JASPAR yes 118401704
chr1 173384880 173384889 SRY JASPAR yes 33197384
chr1 173384880 173384889 SRY JASPAR yes 118401705
chr1 173384887 173384902 FOXP1 JASPAR yes 33197385
chr1 173384887 173384902 FOXP1 JASPAR yes 118401706
chr1 173384887 173384908 IRF1 JASPAR yes 33197386
chr1 173384887 173384908 IRF1 JASPAR yes 118401707
chr1 173384888 173384897 SRY JASPAR yes 33197387
chr1 173384888 173384897 SRY JASPAR yes 118401708
chr1 173384888 173384899 FOXP2 JASPAR yes 33197388
chr1 173384888 173384899 FOXP2 JASPAR yes 118401709
chr1 173384888 173384900 FOXC2 JASPAR yes 33197389
chr1 173384888 173384900 FOXC2 JASPAR yes 118401710
chr1 173384888 173384903 STAT2 JASPAR yes 33197390
chr1 173384888 173384903 STAT2 JASPAR yes 118401711
chr1 173384889 173384900 FOXC1 JASPAR yes 33197391
chr1 173384889 173384900 FOXC1 JASPAR yes 118401712
chr1 173384890 173384901 FOXA1 JASPAR yes 33197392
chr1 173384890 173384901 FOXA1 JASPAR yes 118401713
chr1 173384905 173384917 PBX1 JASPAR yes 33197393
chr1 173384905 173384917 PBX1 JASPAR yes 118401714
chr1 173384910 173384925 FOXA1 JASPAR yes 33197394
chr1 173384910 173384925 FOXA1 JASPAR yes 118401715
chr1 173384913 173384924 FOXB1 JASPAR yes 33197395
chr1 173384913 173384924 FOXC1 JASPAR yes 33197396
chr1 173384913 173384924 FOXB1 JASPAR yes 118401716
chr1 173384913 173384924 FOXC1 JASPAR yes 118401717
chr1 173384914 173384918 YY1 TRANSFAC yes 33197397
chr1 173384914 173384918 YY1 TRANSFAC yes 118401718
chr1 173384914 173384925 FOXA1 JASPAR yes 33197398
chr1 173384914 173384925 FOXA1 JASPAR yes 118401719
chr1 173384922 173384934 TEAD1 JASPAR yes 33197399
chr1 173384922 173384934 TEAD1 JASPAR yes 118401720
chr1 173384925 173384941 SOX4 JASPAR yes 33197400
chr1 173384925 173384941 SOX4 JASPAR yes 118401721
chr1 173384926 173384938 POU2F1 JASPAR yes 33197401
chr1 173384926 173384938 POU2F1 JASPAR yes 118401722
chr1 173384926 173384940 POU1F1 JASPAR yes 33197402
chr1 173384926 173384940 POU1F1 JASPAR yes 118401723
chr1 173384927 173384939 POU3F1 JASPAR yes 33197403
chr1 173384927 173384939 POU3F2 JASPAR yes 33197404
chr1 173384927 173384939 POU3F1 JASPAR yes 118401724
chr1 173384927 173384939 POU3F2 JASPAR yes 118401725
chr1 173384927 173384940 POU2F2 JASPAR yes 33197405
chr1 173384927 173384940 POU2F2 JASPAR yes 118401726
chr1 173384928 173384937 POU3F4 JASPAR yes 33197406
chr1 173384928 173384937 POU5F1B JASPAR yes 33197407
chr1 173384928 173384937 POU3F4 JASPAR yes 118401727
chr1 173384928 173384937 POU5F1B JASPAR yes 118401728
chr1 173384929 173384936 POU2F1 TRANSFAC yes 33197408
chr1 173384929 173384936 POU2F2 TRANSFAC yes 33197409
chr1 173384929 173384936 POU2F1 TRANSFAC yes 118401729
chr1 173384929 173384936 POU2F2 TRANSFAC yes 118401730
SNP sites on vista3947[chr1:173384654-173384941]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 173384827 rs4916354 T C
BATF PAX5 POU2F2
734699
chr1 173384939 rs561463179 CTCTT C
BATF PAX5 POU1F1 POU2F2 POU3F1 POU3F2 SOX4
734700
Genes possibly regulated by vista3947[chr1:173384654-173384941]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 173446405 173457946 + PRDX6 ENSG00000117592.8 173446405 0.68 0.99 1577 38536
Expression level of Genes
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miRNAs possibly regulated by vista3947[chr1:173384654-173384941]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results