EnhancerDB
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  3. rs561463179[chr1:173384939]
Enhancers that have rs561463179[chr1:173384939]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 173367664 173402717 enh734
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673)
chr1 173384654 173384941 vista3947
VISTA
Transcript factors that have rs561463179[chr1:173384939]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 173384579 173385099 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846700
chr1 173384589 173385109 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846701
chr1 173384592 173385002 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846702
chr1 173384611 173384991 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846703
chr1 173384626 173385046 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846704
chr1 173384646 173384976 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846705
chr1 173384649 173384959 POU2F2 UCSC Txn Factor no Conserved 107846706
chr1 173384673 173384953 PAX5 UCSC Txn Factor no Conserved 107846707
chr1 173384674 173384978 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846708
chr1 173384675 173384995 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846709
chr1 173384684 173385068 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846710
chr1 173384687 173385097 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846711
chr1 173384692 173384972 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846713
chr1 173384701 173385041 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846714
chr1 173384701 173385081 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846715
chr1 173384702 173384962 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846716
chr1 173384710 173384996 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846717
chr1 173384713 173385043 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846719
chr1 173384728 173385018 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846720
chr1 173384746 173384956 BATF UCSC Txn Factor no Conserved 107846723
chr1 173384746 173384956 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846724
chr1 173384756 173385192 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846725
chr1 173384757 173385027 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846726
chr1 173384759 173384949 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846727
chr1 173384760 173385356 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846728
chr1 173384925 173384941 SOX4 JASPAR yes 33197400
chr1 173384925 173384941 SOX4 JASPAR yes 118401721
chr1 173384926 173384940 POU1F1 JASPAR yes 33197402
chr1 173384926 173384940 POU1F1 JASPAR yes 118401723
chr1 173384927 173384939 POU3F1 JASPAR yes 33197403
chr1 173384927 173384939 POU3F2 JASPAR yes 33197404
chr1 173384927 173384939 POU3F1 JASPAR yes 118401724
chr1 173384927 173384939 POU3F2 JASPAR yes 118401725
chr1 173384927 173384940 POU2F2 JASPAR yes 33197405
chr1 173384927 173384940 POU2F2 JASPAR yes 118401726
Genes associated with rs561463179[chr1:173384939], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More