EnhancerDB
  1. Home
  2. Enhancers
  3. vista3949[chr1:173398914-173399297]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista3949[chr1:173398914-173399297]
Back to top
Tissue distribution of vista3949
Back to top
Transcription factor that possibly regulate vista3949[chr1:173398914-173399297]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 173398545 173399570 POLR2A UCSC Txn Factor no Conserved 107846733
chr1 173398614 173398944 MAX UCSC Txn Factor no Conserved 107846743
chr1 173398621 173399339 CTCF UCSC Txn Factor no Conserved 107846747
chr1 173398963 173399419 JUND UCSC Txn Factor no Conserved 107846771
chr1 173398979 173399617 GATA1 UCSC Txn Factor no Conserved 107846775
chr1 173399077 173399365 EGR1 UCSC Txn Factor no Conserved 107846806
chr1 173399134 173399384 TEAD4 UCSC Txn Factor no Conserved 107846823
chr1 173398909 173398918 PITX3 JASPAR yes 33199474
chr1 173398909 173398918 PITX3 JASPAR yes 118401798
chr1 173398909 173398919 GSC2 JASPAR yes 33199475
chr1 173398909 173398919 GSC JASPAR yes 33199476
chr1 173398909 173398919 GSC2 JASPAR yes 118401799
chr1 173398909 173398919 GSC JASPAR yes 118401800
chr1 173398910 173398918 OTX1 JASPAR yes 33199477
chr1 173398910 173398918 OTX1 JASPAR yes 118401801
chr1 173398913 173398923 MZF1 JASPAR yes 33199478
chr1 173398913 173398923 MZF1 JASPAR yes 118401802
chr1 173398925 173398930 GATA2 JASPAR yes 33199479
chr1 173398925 173398930 GATA2 JASPAR yes 118401803
chr1 173398936 173398951 PRDM1 JASPAR yes 33199480
chr1 173398936 173398951 PRDM1 JASPAR yes 118401804
chr1 173398938 173398959 ZNF263 JASPAR yes 33199481
chr1 173398938 173398959 ZNF263 JASPAR yes 118401805
chr1 173398939 173398944 ETS2 TRANSFAC yes 33199482
chr1 173398939 173398944 ETS2 TRANSFAC yes 118401806
chr1 173398960 173398968 DLX6 JASPAR yes 33199483
chr1 173398960 173398968 MSX1 JASPAR yes 33199484
chr1 173398960 173398968 DLX6 JASPAR yes 118401807
chr1 173398960 173398968 MSX1 JASPAR yes 118401808
chr1 173398963 173398972 NFIX JASPAR yes 33199485
chr1 173398963 173398972 NFIX JASPAR yes 118401809
chr1 173398963 173398973 NFIA JASPAR yes 33199486
chr1 173398963 173398973 NFIA JASPAR yes 118401810
chr1 173398965 173398971 NFIC JASPAR yes 33199487
chr1 173398965 173398971 NFIC JASPAR yes 118401811
chr1 173398968 173398980 PROX1 JASPAR yes 33199488
chr1 173398968 173398980 PROX1 JASPAR yes 118401812
chr1 173398970 173398982 INSM1 JASPAR yes 33199489
chr1 173398970 173398982 INSM1 JASPAR yes 118401813
chr1 173398981 173398992 ESRRA JASPAR yes 33199490
chr1 173398981 173398992 ESRRA JASPAR yes 118401814
chr1 173398983 173398995 TGIF1 JASPAR yes 33199491
chr1 173398983 173398995 TGIF1 JASPAR yes 118401815
chr1 173398990 173398994 ESR1 TRANSFAC yes 33199492
chr1 173398990 173398994 ESR1 TRANSFAC yes 118401816
chr1 173399007 173399018 ELK4 JASPAR yes 33199493
chr1 173399007 173399018 FLI1 JASPAR yes 33199494
chr1 173399007 173399018 ELK4 JASPAR yes 118401817
chr1 173399007 173399018 FLI1 JASPAR yes 118401818
chr1 173399008 173399021 ELF1 JASPAR yes 33199495
chr1 173399008 173399021 ELF1 JASPAR yes 118401819
chr1 173399042 173399052 SREBF2 JASPAR yes 33199496
chr1 173399042 173399052 SREBF2 JASPAR yes 118401820
chr1 173399053 173399057 NFE TRANSFAC yes 33199497
chr1 173399053 173399057 NFE TRANSFAC yes 118401821
chr1 173399055 173399065 NHLH1 JASPAR yes 33199498
chr1 173399055 173399065 NHLH1 JASPAR yes 118401822
chr1 173399066 173399072 LEF1 TRANSFAC yes 33199499
chr1 173399066 173399072 SOX10 JASPAR yes 33199500
chr1 173399066 173399072 LEF1 TRANSFAC yes 118401823
chr1 173399066 173399072 SOX10 JASPAR yes 118401824
chr1 173399068 173399083 MEF2A JASPAR yes 33199501
chr1 173399068 173399083 MEF2A JASPAR yes 118401825
chr1 173399081 173399096 MEF2A JASPAR yes 33199502
chr1 173399081 173399096 MEF2A JASPAR yes 118401826
chr1 173399082 173399094 MEF2A JASPAR yes 33199503
chr1 173399082 173399094 MEF2B JASPAR yes 33199504
chr1 173399082 173399094 MEF2D JASPAR yes 33199505
chr1 173399082 173399094 MEF2A JASPAR yes 118401827
chr1 173399082 173399094 MEF2B JASPAR yes 118401828
chr1 173399082 173399094 MEF2D JASPAR yes 118401829
chr1 173399083 173399093 MEF2A JASPAR yes 33199506
chr1 173399083 173399093 MEF2A JASPAR yes 118401830
chr1 173399084 173399088 TEAD2 TRANSFAC yes 33199507
chr1 173399084 173399088 TEAD2 TRANSFAC yes 118401831
chr1 173399084 173399094 ALX3 JASPAR yes 33199508
chr1 173399084 173399094 MEOX2 JASPAR yes 33199509
chr1 173399084 173399094 MNX1 JASPAR yes 33199510
chr1 173399084 173399094 ALX3 JASPAR yes 118401832
chr1 173399084 173399094 MEOX2 JASPAR yes 118401833
chr1 173399084 173399094 MNX1 JASPAR yes 118401834
chr1 173399085 173399093 LBX1 JASPAR yes 33199511
chr1 173399085 173399093 PDX1 JASPAR yes 33199512
chr1 173399085 173399093 VAX1 JASPAR yes 33199513
chr1 173399085 173399093 VAX2 JASPAR yes 33199514
chr1 173399085 173399093 VSX1 JASPAR yes 33199515
chr1 173399085 173399093 VSX2 JASPAR yes 33199516
chr1 173399085 173399093 LBX1 JASPAR yes 118401835
chr1 173399085 173399093 PDX1 JASPAR yes 118401836
chr1 173399085 173399093 VAX1 JASPAR yes 118401837
chr1 173399085 173399093 VAX2 JASPAR yes 118401838
chr1 173399085 173399093 VSX1 JASPAR yes 118401839
chr1 173399085 173399093 VSX2 JASPAR yes 118401840
chr1 173399085 173399095 POU6F2 JASPAR yes 33199517
chr1 173399085 173399095 POU6F2 JASPAR yes 118401841
chr1 173399085 173399098 DUXA JASPAR yes 33199518
chr1 173399085 173399098 DUXA JASPAR yes 118401842
chr1 173399086 173399097 PHOX2A JASPAR yes 33199519
chr1 173399086 173399097 PROP1 JASPAR yes 33199520
chr1 173399086 173399097 PHOX2A JASPAR yes 118401843
chr1 173399086 173399097 PROP1 JASPAR yes 118401844
chr1 173399116 173399125 NKX2-8 JASPAR yes 33199521
chr1 173399116 173399125 NKX2-8 JASPAR yes 118401845
chr1 173399116 173399126 NKX2-3 JASPAR yes 33199522
chr1 173399116 173399126 NKX2-3 JASPAR yes 118401846
chr1 173399124 173399128 NFE TRANSFAC yes 33199523
chr1 173399124 173399128 NFE TRANSFAC yes 118401847
chr1 173399125 173399130 GATA2 JASPAR yes 33199524
chr1 173399125 173399130 GATA2 JASPAR yes 118401848
chr1 173399128 173399143 MEF2A JASPAR yes 33199525
chr1 173399128 173399143 MEF2A JASPAR yes 118401849
chr1 173399129 173399144 MEF2C JASPAR yes 33199526
chr1 173399129 173399144 MEF2C JASPAR yes 118401850
chr1 173399130 173399142 MEF2A JASPAR yes 33199527
chr1 173399130 173399142 MEF2B JASPAR yes 33199528
chr1 173399130 173399142 MEF2D JASPAR yes 33199529
chr1 173399130 173399142 MEF2A JASPAR yes 118401851
chr1 173399130 173399142 MEF2B JASPAR yes 118401852
chr1 173399130 173399142 MEF2D JASPAR yes 118401853
chr1 173399131 173399141 MEF2A JASPAR yes 33199530
chr1 173399131 173399141 MEF2A JASPAR yes 118401854
chr1 173399132 173399136 YY1 TRANSFAC yes 33199531
chr1 173399132 173399136 YY1 TRANSFAC yes 118401855
chr1 173399138 173399141 MYB TRANSFAC yes 33199532
chr1 173399138 173399141 MYB TRANSFAC yes 118401856
chr1 173399182 173399194 NHLH1 JASPAR yes 33199533
chr1 173399182 173399194 NHLH1 JASPAR yes 118401857
chr1 173399183 173399193 MSC JASPAR yes 33199534
chr1 173399183 173399193 NHLH1 JASPAR yes 33199535
chr1 173399183 173399193 TFAP4 JASPAR yes 33199536
chr1 173399183 173399193 MSC JASPAR yes 118401858
chr1 173399183 173399193 NHLH1 JASPAR yes 118401859
chr1 173399183 173399193 TFAP4 JASPAR yes 118401860
chr1 173399183 173399201 MAFF JASPAR yes 33199537
chr1 173399183 173399201 MAFF JASPAR yes 118401861
chr1 173399190 173399201 FOSL1 JASPAR yes 33199538
chr1 173399190 173399201 FOSL1 JASPAR yes 118401862
chr1 173399192 173399203 BATF JASPAR yes 33199539
chr1 173399192 173399203 BATF JASPAR yes 118401863
chr1 173399215 173399226 FLI1 JASPAR yes 33199540
chr1 173399215 173399226 FLI1 JASPAR yes 118401864
chr1 173399216 173399229 ELF1 JASPAR yes 33199541
chr1 173399216 173399229 ELF1 JASPAR yes 118401865
chr1 173399217 173399225 EHF JASPAR yes 33199542
chr1 173399217 173399225 EHF JASPAR yes 118401866
chr1 173399226 173399238 NHLH1 JASPAR yes 33199543
chr1 173399226 173399238 NHLH1 JASPAR yes 118401867
chr1 173399227 173399237 NHLH1 JASPAR yes 33199544
chr1 173399227 173399237 NHLH1 JASPAR yes 118401868
chr1 173399234 173399242 TEAD3 JASPAR yes 33199545
chr1 173399234 173399242 TEAD3 JASPAR yes 118401869
chr1 173399243 173399249 TBP TRANSFAC yes 33199546
chr1 173399243 173399249 TBP TRANSFAC yes 118401870
chr1 173399254 173399263 THAP1 JASPAR yes 33199547
chr1 173399254 173399263 THAP1 JASPAR yes 118401871
chr1 173399286 173399297 FOXA1 JASPAR yes 33199548
chr1 173399286 173399297 FOXA1 JASPAR yes 118401872
SNP sites on vista3949[chr1:173398914-173399297]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 173398953 rs116300445 G A
CTCF POLR2A ZNF263
734893
chr1 173398987 rs148994601 C T
CTCF ESRRA GATA1 JUND POLR2A TGIF1
734894
chr1 173399174 rs546322227 G C
CTCF EGR1 GATA1 JUND POLR2A TEAD4
734895
chr1 173399295 rs186887700 A G,T
CTCF EGR1 FOXA1 GATA1 JUND POLR2A TEAD4
734896
Genes possibly regulated by vista3949[chr1:173398914-173399297]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 173446405 173457946 + PRDX6 ENSG00000117592.8 173446405 0.68 0.99 1577 52892
Expression level of Genes
Back to top
miRNAs possibly regulated by vista3949[chr1:173398914-173399297]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results