EnhancerDB
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  3. rs116300445[chr1:173398953]
Enhancers that have rs116300445[chr1:173398953]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 173367664 173402717 enh734
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673)
chr1 173398914 173399297 vista3949
VISTA
Transcript factors that have rs116300445[chr1:173398953]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 173398545 173399570 POLR2A UCSC Txn Factor no Conserved 107846733
chr1 173398553 173399073 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107846734
chr1 173398564 173399004 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21351425
chr1 173398564 173399004 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107846735
chr1 173398576 173399012 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846737
chr1 173398583 173398953 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21351426
chr1 173398583 173398953 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107846738
chr1 173398600 173398964 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21351427
chr1 173398600 173398964 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107846739
chr1 173398621 173398981 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846746
chr1 173398621 173399339 CTCF UCSC Txn Factor no Conserved 107846747
chr1 173398642 173399002 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21351431
chr1 173398642 173399002 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107846748
chr1 173398692 173398962 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846756
chr1 173398714 173399064 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21351442
chr1 173398714 173399064 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107846759
chr1 173398738 173399382 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21351445
chr1 173398738 173399382 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107846760
chr1 173398748 173399152 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21351446
chr1 173398748 173399152 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107846761
chr1 173398776 173399172 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21351447
chr1 173398776 173399172 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107846762
chr1 173398778 173399428 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21351448
chr1 173398778 173399428 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107846763
chr1 173398804 173399148 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21351449
chr1 173398804 173399148 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107846764
chr1 173398807 173399207 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846765
chr1 173398875 173399440 ZNF274 GTRD no Bone Marrow (K562) 21351451
chr1 173398875 173399440 ZNF274 GTRD no Bone Marrow (K562) 107846766
chr1 173398889 173399249 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21351452
chr1 173398889 173399249 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107846767
chr1 173398919 173399275 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21351453
chr1 173398919 173399275 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107846768
chr1 173398935 173399511 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21351454
chr1 173398935 173399511 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107846769
chr1 173398938 173398959 ZNF263 JASPAR yes 33199481
chr1 173398938 173398959 ZNF263 JASPAR yes 118401805
chr1 173398951 173399467 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21351455
chr1 173398951 173399467 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107846770
Genes associated with rs116300445[chr1:173398953], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More