EnhancerDB
  1. Home
  2. Enhancers
  3. vista39913[chr3:10234749-10235085]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista39913[chr3:10234749-10235085]
Back to top
Tissue distribution of vista39913
Back to top
Transcription factor that possibly regulate vista39913[chr3:10234749-10235085]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 10234517 10234941 CTCF UCSC Txn Factor no Conserved 108528163
chr3 10234719 10235035 EBF1 UCSC Txn Factor no Conserved 108528164
chr3 10234761 10234993 PAX5 UCSC Txn Factor no Conserved 108528165
chr3 10234767 10234780 POU2F2 JASPAR yes 362933
chr3 10234767 10234780 POU2F2 JASPAR yes 70935566
chr3 10234769 10234773 YY1 TRANSFAC yes 362934
chr3 10234769 10234773 YY1 TRANSFAC yes 70935567
chr3 10234776 10234782 ETS1 JASPAR yes 362935
chr3 10234776 10234782 SPI1 JASPAR yes 362936
chr3 10234776 10234782 ETS1 JASPAR yes 70935568
chr3 10234776 10234782 SPI1 JASPAR yes 70935569
chr3 10234788 10234799 FOSL2 JASPAR yes 362937
chr3 10234788 10234799 JUNB JASPAR yes 362938
chr3 10234788 10234799 FOSL2 JASPAR yes 70935570
chr3 10234788 10234799 JUNB JASPAR yes 70935571
chr3 10234789 10234800 FOS JASPAR yes 362939
chr3 10234789 10234800 JUND JASPAR yes 362940
chr3 10234789 10234800 NFE2 JASPAR yes 362941
chr3 10234789 10234800 FOS JASPAR yes 70935572
chr3 10234789 10234800 JUND JASPAR yes 70935573
chr3 10234789 10234800 NFE2 JASPAR yes 70935574
chr3 10234798 10234808 POU6F2 JASPAR yes 362942
chr3 10234798 10234808 POU6F2 JASPAR yes 70935575
chr3 10234799 10234809 EMX1 JASPAR yes 362943
chr3 10234799 10234809 EVX1 JASPAR yes 362944
chr3 10234799 10234809 EVX2 JASPAR yes 362945
chr3 10234799 10234809 NOTO JASPAR yes 362946
chr3 10234799 10234809 EMX1 JASPAR yes 70935576
chr3 10234799 10234809 EVX1 JASPAR yes 70935577
chr3 10234799 10234809 EVX2 JASPAR yes 70935578
chr3 10234799 10234809 NOTO JASPAR yes 70935579
chr3 10234802 10234806 YY1 TRANSFAC yes 362947
chr3 10234802 10234806 YY1 TRANSFAC yes 70935580
chr3 10234819 10234827 TEAD3 JASPAR yes 362948
chr3 10234819 10234827 TEAD3 JASPAR yes 70935581
chr3 10234824 10234838 IRF7 JASPAR yes 362949
chr3 10234824 10234838 IRF7 JASPAR yes 70935582
chr3 10234826 10234835 SRY JASPAR yes 362950
chr3 10234826 10234835 SRY JASPAR yes 70935583
chr3 10234827 10234848 IRF1 JASPAR yes 362951
chr3 10234827 10234848 IRF1 JASPAR yes 70935584
chr3 10234833 10234854 IRF1 JASPAR yes 362952
chr3 10234833 10234854 IRF1 JASPAR yes 70935585
chr3 10234837 10234858 IRF1 JASPAR yes 362953
chr3 10234837 10234858 IRF1 JASPAR yes 70935586
chr3 10234841 10234855 STAT1 JASPAR yes 362954
chr3 10234841 10234855 STAT1 JASPAR yes 70935587
chr3 10234841 10234856 STAT2 JASPAR yes 362955
chr3 10234841 10234856 STAT2 JASPAR yes 70935588
chr3 10234854 10234869 RFX5 JASPAR yes 362956
chr3 10234854 10234869 RFX5 JASPAR yes 70935589
chr3 10234870 10234887 PAX1 JASPAR yes 362957
chr3 10234870 10234887 PAX9 JASPAR yes 362958
chr3 10234870 10234887 PAX1 JASPAR yes 70935590
chr3 10234870 10234887 PAX9 JASPAR yes 70935591
chr3 10234881 10234889 MEIS2 JASPAR yes 362959
chr3 10234881 10234889 MEIS3 JASPAR yes 362960
chr3 10234881 10234889 MEIS2 JASPAR yes 70935592
chr3 10234881 10234889 MEIS3 JASPAR yes 70935593
chr3 10234888 10234892 LFA1 TRANSFAC yes 362961
chr3 10234888 10234892 LFA1 TRANSFAC yes 70935594
chr3 10234906 10234912 NFE2 TRANSFAC yes 362962
chr3 10234906 10234912 NFE2 TRANSFAC yes 70935595
chr3 10234907 10234928 ZNF263 JASPAR yes 362963
chr3 10234907 10234928 ZNF263 JASPAR yes 70935596
chr3 10234909 10234915 SP1 TRANSFAC yes 362964
chr3 10234909 10234915 SP1 TRANSFAC yes 70935597
chr3 10234909 10234919 SP1 JASPAR yes 362965
chr3 10234909 10234919 SP1 JASPAR yes 70935598
chr3 10234910 10234931 ZNF263 JASPAR yes 362966
chr3 10234910 10234931 ZNF263 JASPAR yes 70935599
chr3 10234917 10234928 FLI1 JASPAR yes 362967
chr3 10234917 10234928 FLI1 JASPAR yes 70935600
chr3 10234918 10234922 YY1 TRANSFAC yes 362968
chr3 10234918 10234922 YY1 TRANSFAC yes 70935601
chr3 10234918 10234931 ELF1 JASPAR yes 362969
chr3 10234918 10234931 ELF1 JASPAR yes 70935602
chr3 10234919 10234927 FEV JASPAR yes 362970
chr3 10234919 10234927 FEV JASPAR yes 70935603
chr3 10234930 10234935 GATA1 TRANSFAC yes 362971
chr3 10234930 10234935 GATA1 TRANSFAC yes 70935604
chr3 10234989 10234994 GATA2 JASPAR yes 362972
chr3 10234989 10234994 GATA2 JASPAR yes 70935605
chr3 10234992 10234997 GATA2 JASPAR yes 362973
chr3 10234992 10234997 GATA2 JASPAR yes 70935606
chr3 10235016 10235029 SMAD2 JASPAR yes 362974
chr3 10235016 10235029 SMAD2 JASPAR yes 70935607
chr3 10235019 10235029 TBR1 JASPAR yes 362975
chr3 10235019 10235029 TBR1 JASPAR yes 70935608
chr3 10235020 10235030 TBX21 JASPAR yes 362976
chr3 10235020 10235030 TBX21 JASPAR yes 70935609
chr3 10235021 10235029 MGA JASPAR yes 362977
chr3 10235021 10235029 TBX15 JASPAR yes 362978
chr3 10235021 10235029 TBX1 JASPAR yes 362979
chr3 10235021 10235029 TBX4 JASPAR yes 362980
chr3 10235021 10235029 TBX5 JASPAR yes 362981
chr3 10235021 10235029 MGA JASPAR yes 70935610
chr3 10235021 10235029 TBX15 JASPAR yes 70935611
chr3 10235021 10235029 TBX1 JASPAR yes 70935612
chr3 10235021 10235029 TBX4 JASPAR yes 70935613
chr3 10235021 10235029 TBX5 JASPAR yes 70935614
chr3 10235021 10235030 ZEB1 JASPAR yes 362982
chr3 10235021 10235030 ZEB1 JASPAR yes 70935615
chr3 10235021 10235033 PKNOX1 JASPAR yes 362983
chr3 10235021 10235033 TGIF1 JASPAR yes 362984
chr3 10235021 10235033 PKNOX1 JASPAR yes 70935616
chr3 10235021 10235033 TGIF1 JASPAR yes 70935617
chr3 10235021 10235034 ZBTB18 JASPAR yes 362985
chr3 10235021 10235034 ZBTB18 JASPAR yes 70935618
chr3 10235022 10235032 FIGLA JASPAR yes 362986
chr3 10235022 10235032 ID4 JASPAR yes 362987
chr3 10235022 10235032 TCF3 JASPAR yes 362988
chr3 10235022 10235032 TCF4 JASPAR yes 362989
chr3 10235022 10235032 FIGLA JASPAR yes 70935619
chr3 10235022 10235032 ID4 JASPAR yes 70935620
chr3 10235022 10235032 TCF3 JASPAR yes 70935621
chr3 10235022 10235032 TCF4 JASPAR yes 70935622
chr3 10235023 10235032 SNAI2 JASPAR yes 362990
chr3 10235023 10235032 SNAI2 JASPAR yes 70935623
chr3 10235024 10235029 USF2 TRANSFAC yes 362991
chr3 10235024 10235029 USF2 TRANSFAC yes 70935624
SNP sites on vista39913[chr3:10234749-10235085]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 10234763 rs55864356 G A
CTCF EBF1 PAX5
6541982
chr3 10234827 rs115540773 G A
CTCF EBF1 IRF1 IRF7 PAX5 SRY TEAD3
6541983
chr3 10234853 rs9872943 T G
CTCF EBF1 IRF1 PAX5 STAT1 STAT2
6541984
chr3 10234887 rs545806830 A G
CTCF EBF1 MEIS2 MEIS3 PAX1 PAX5 PAX9
6541985
chr3 10234990 rs114171686 G A
EBF1 GATA2 PAX5
6541986
Genes possibly regulated by vista39913[chr3:10234749-10235085]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 10123001 10149915 - FANCD2OS ENSG00000163705.8 10149915 0.98 1.0 3399 15166
chr3 10157276 10168874 + BRK1 ENSG00000254999.2 10157276 0.52 0.99 3400 22527
chr3 10182692 10193904 + VHL ENSG00000134086.7 10182692 0.76 0.99 3401 47943
chr3 10206549 10285427 + IRAK2 ENSG00000134070.4 10206549 0.82 0.99 3402 71800
chr3 10289707 10322902 + TATDN2 ENSG00000157014.6 10289707 0.67 0.97 3403 45378
chr3 10291056 10327480 + RP11-438J1.1 ENSG00000272410.1 10291056 0.88 0.81 3404 44029
chr3 10327359 10334631 - GHRL ENSG00000157017.11 10334631 0.98 0.99 3405 454
Expression level of Genes
Back to top
miRNAs possibly regulated by vista39913[chr3:10234749-10235085]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results