EnhancerDB
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  3. rs9872943[chr3:10234853]
Enhancers that have rs9872943[chr3:10234853]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 10220648 10240655 enh20318
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr3 10234749 10235085 vista39913
VISTA
Transcript factors that have rs9872943[chr3:10234853]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 10234517 10234941 CTCF UCSC Txn Factor no Conserved 108528163
chr3 10234719 10235035 EBF1 UCSC Txn Factor no Conserved 108528164
chr3 10234761 10234993 PAX5 UCSC Txn Factor no Conserved 108528165
chr3 10234833 10234854 IRF1 JASPAR yes 362952
chr3 10234833 10234854 IRF1 JASPAR yes 70935585
chr3 10234837 10234858 IRF1 JASPAR yes 362953
chr3 10234837 10234858 IRF1 JASPAR yes 70935586
chr3 10234841 10234855 STAT1 JASPAR yes 362954
chr3 10234841 10234855 STAT1 JASPAR yes 70935587
chr3 10234841 10234856 STAT2 JASPAR yes 362955
chr3 10234841 10234856 STAT2 JASPAR yes 70935588
Genes associated with rs9872943[chr3:10234853], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More