EnhancerDB
  1. Home
  2. Enhancers
  3. vista39914[chr3:10236121-10236711]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista39914[chr3:10236121-10236711]
Back to top
Tissue distribution of vista39914
Back to top
Transcription factor that possibly regulate vista39914[chr3:10236121-10236711]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 10236180 10236420 EGR1 UCSC Txn Factor no Conserved 108528166
chr3 10236136 10236151 HNF4A JASPAR yes 363117
chr3 10236136 10236151 HNF4A JASPAR yes 70935625
chr3 10236142 10236149 E2F1 TRANSFAC yes 363118
chr3 10236142 10236149 E2F1 TRANSFAC yes 70935626
chr3 10236149 10236155 NFIC JASPAR yes 363119
chr3 10236149 10236155 NFIC JASPAR yes 70935627
chr3 10236152 10236166 GATA2 JASPAR yes 363120
chr3 10236152 10236166 GATA2 JASPAR yes 70935628
chr3 10236154 10236160 GATA3 JASPAR yes 363121
chr3 10236154 10236160 GATA3 JASPAR yes 70935629
chr3 10236204 10236219 HNF4G JASPAR yes 363122
chr3 10236204 10236219 HNF4G JASPAR yes 70935630
chr3 10236207 10236211 YY1 TRANSFAC yes 363123
chr3 10236207 10236211 YY1 TRANSFAC yes 70935631
chr3 10236216 10236237 ZNF263 JASPAR yes 363124
chr3 10236216 10236237 ZNF263 JASPAR yes 70935632
chr3 10236230 10236245 LEF1 JASPAR yes 363125
chr3 10236230 10236245 LEF1 JASPAR yes 70935633
chr3 10236236 10236257 IRF1 JASPAR yes 363126
chr3 10236236 10236257 IRF1 JASPAR yes 70935634
chr3 10236241 10236256 MEF2A JASPAR yes 363127
chr3 10236241 10236256 MEF2A JASPAR yes 70935635
chr3 10236242 10236257 MEF2C JASPAR yes 363128
chr3 10236242 10236257 MEF2C JASPAR yes 70935636
chr3 10236243 10236255 MEF2A JASPAR yes 363129
chr3 10236243 10236255 MEF2B JASPAR yes 363130
chr3 10236243 10236255 MEF2D JASPAR yes 363131
chr3 10236243 10236255 MEF2A JASPAR yes 70935637
chr3 10236243 10236255 MEF2B JASPAR yes 70935638
chr3 10236243 10236255 MEF2D JASPAR yes 70935639
chr3 10236244 10236254 MEF2A JASPAR yes 363132
chr3 10236244 10236254 MEF2A JASPAR yes 70935640
chr3 10236245 10236249 YY1 TRANSFAC yes 363133
chr3 10236245 10236249 YY1 TRANSFAC yes 70935641
chr3 10236251 10236255 YY1 TRANSFAC yes 363134
chr3 10236251 10236255 YY1 TRANSFAC yes 70935642
chr3 10236269 10236282 SMAD2 JASPAR yes 363135
chr3 10236269 10236282 SMAD2 JASPAR yes 70935643
chr3 10236315 10236336 ZNF263 JASPAR yes 363136
chr3 10236315 10236336 ZNF263 JASPAR yes 70935644
chr3 10236333 10236348 HNF4G JASPAR yes 363137
chr3 10236333 10236348 NR2C2 JASPAR yes 363138
chr3 10236333 10236348 HNF4G JASPAR yes 70935645
chr3 10236333 10236348 NR2C2 JASPAR yes 70935646
chr3 10236334 10236349 HNF4A JASPAR yes 363139
chr3 10236334 10236349 HNF4A JASPAR yes 70935647
chr3 10236341 10236353 YY1 JASPAR yes 363140
chr3 10236341 10236353 YY1 JASPAR yes 70935648
chr3 10236346 10236350 YY1 TRANSFAC yes 363141
chr3 10236346 10236350 YY1 TRANSFAC yes 70935649
chr3 10236378 10236398 TP53 JASPAR yes 363142
chr3 10236378 10236398 TP53 JASPAR yes 70935650
chr3 10236380 10236400 TP63 JASPAR yes 363143
chr3 10236380 10236400 TP63 JASPAR yes 70935651
chr3 10236381 10236399 TP53 JASPAR yes 363144
chr3 10236381 10236399 TP73 JASPAR yes 363145
chr3 10236381 10236399 TP53 JASPAR yes 70935652
chr3 10236381 10236399 TP73 JASPAR yes 70935653
chr3 10236382 10236397 TP53 JASPAR yes 363146
chr3 10236382 10236397 TP53 JASPAR yes 70935654
chr3 10236382 10236402 TP53 JASPAR yes 363147
chr3 10236382 10236402 TP53 JASPAR yes 70935655
chr3 10236383 10236398 TP53 JASPAR yes 363148
chr3 10236383 10236398 TP53 JASPAR yes 70935656
chr3 10236398 10236402 NFE TRANSFAC yes 363149
chr3 10236398 10236402 NFE TRANSFAC yes 70935657
chr3 10236444 10236450 SP1 TRANSFAC yes 363150
chr3 10236444 10236450 SP1 TRANSFAC yes 70935658
chr3 10236445 10236450 SP1 TRANSFAC yes 363151
chr3 10236445 10236450 SP1 TRANSFAC yes 70935659
chr3 10236454 10236462 FOXG1 JASPAR yes 363152
chr3 10236454 10236462 FOXG1 JASPAR yes 70935660
chr3 10236458 10236474 E2F2 JASPAR yes 363153
chr3 10236458 10236474 E2F2 JASPAR yes 70935661
chr3 10236459 10236473 PAX6 JASPAR yes 363154
chr3 10236459 10236473 PAX6 JASPAR yes 70935662
chr3 10236466 10236476 BARHL2 JASPAR yes 363155
chr3 10236466 10236476 BARHL2 JASPAR yes 70935663
chr3 10236468 10236472 YY1 TRANSFAC yes 363156
chr3 10236468 10236472 YY1 TRANSFAC yes 70935664
chr3 10236468 10236479 HOXA10 JASPAR yes 363157
chr3 10236468 10236479 HOXA10 JASPAR yes 70935665
chr3 10236469 10236478 CDX1 JASPAR yes 363158
chr3 10236469 10236478 CDX1 JASPAR yes 70935666
chr3 10236469 10236480 CDX2 JASPAR yes 363159
chr3 10236469 10236480 CDX2 JASPAR yes 70935667
chr3 10236481 10236485 YY1 TRANSFAC yes 363160
chr3 10236481 10236485 YY1 TRANSFAC yes 70935668
chr3 10236498 10236510 IRF1 JASPAR yes 363161
chr3 10236498 10236510 IRF1 JASPAR yes 70935669
chr3 10236532 10236546 SPI1 JASPAR yes 363162
chr3 10236532 10236546 SPI1 JASPAR yes 70935670
chr3 10236532 10236547 STAT2 JASPAR yes 363163
chr3 10236532 10236547 STAT2 JASPAR yes 70935671
chr3 10236570 10236581 FOXA1 JASPAR yes 363164
chr3 10236570 10236581 FOXA1 JASPAR yes 70935672
chr3 10236585 10236603 ESR1 JASPAR yes 363165
chr3 10236585 10236603 ESR1 JASPAR yes 70935673
chr3 10236586 10236601 ESR2 JASPAR yes 363166
chr3 10236586 10236601 ESR2 JASPAR yes 70935674
chr3 10236589 10236599 SREBF1 JASPAR yes 363167
chr3 10236589 10236599 SREBF2 JASPAR yes 363168
chr3 10236589 10236599 SREBF1 JASPAR yes 70935675
chr3 10236589 10236599 SREBF2 JASPAR yes 70935676
chr3 10236590 10236598 MGA JASPAR yes 363169
chr3 10236590 10236598 MGA JASPAR yes 70935677
chr3 10236615 10236621 MAZ TRANSFAC yes 363170
chr3 10236615 10236621 MAZ TRANSFAC yes 70935678
chr3 10236621 10236627 ZNF354C JASPAR yes 363171
chr3 10236621 10236627 ZNF354C JASPAR yes 70935679
chr3 10236635 10236653 MAFF JASPAR yes 363172
chr3 10236635 10236653 MAFF JASPAR yes 70935680
chr3 10236637 10236648 NRL JASPAR yes 363173
chr3 10236637 10236648 NRL JASPAR yes 70935681
chr3 10236637 10236652 MAFK JASPAR yes 363174
chr3 10236637 10236652 MAFK JASPAR yes 70935682
chr3 10236654 10236658 ESR1 TRANSFAC yes 363175
chr3 10236654 10236658 ESR1 TRANSFAC yes 70935683
chr3 10236661 10236677 RFX4 JASPAR yes 363176
chr3 10236661 10236677 RFX4 JASPAR yes 70935684
chr3 10236674 10236684 SP1 JASPAR yes 363177
chr3 10236674 10236684 SP1 JASPAR yes 70935685
chr3 10236677 10236682 SP1 TRANSFAC yes 363178
chr3 10236677 10236682 SP1 TRANSFAC yes 70935686
chr3 10236677 10236683 SP1 TRANSFAC yes 363179
chr3 10236677 10236683 SP1 TRANSFAC yes 70935687
chr3 10236679 10236689 SP1 TRANSFAC yes 363180
chr3 10236679 10236689 SP1 TRANSFAC yes 70935688
chr3 10236680 10236686 SP1 TRANSFAC yes 363181
chr3 10236680 10236686 SP1 TRANSFAC yes 70935689
chr3 10236680 10236690 SP1 JASPAR yes 363182
chr3 10236680 10236690 SP1 JASPAR yes 70935690
chr3 10236680 10236701 ZNF263 JASPAR yes 363183
chr3 10236680 10236701 ZNF263 JASPAR yes 70935691
chr3 10236683 10236704 ZNF263 JASPAR yes 363184
chr3 10236683 10236704 ZNF263 JASPAR yes 70935692
chr3 10236684 10236690 MZF1 JASPAR yes 363185
chr3 10236684 10236690 MZF1 JASPAR yes 70935693
SNP sites on vista39914[chr3:10236121-10236711]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 10236121 rs9862553 C T no 6542009
chr3 10236122 rs557784440 G A no 6542010
chr3 10236242 rs79216420 G T
EGR1 IRF1 LEF1 MEF2A MEF2C
6542011
chr3 10236464 rs74893491 C T
E2F2 PAX6
6542012
chr3 10236562 rs560571336 A G no 6542013
chr3 10236599 rs545868093 C T
ESR1 ESR2 SREBF1 SREBF2
6542014
Genes possibly regulated by vista39914[chr3:10236121-10236711]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 10123001 10149915 - FANCD2OS ENSG00000163705.8 10149915 0.98 1.0 3399 13794
chr3 10157276 10168874 + BRK1 ENSG00000254999.2 10157276 0.52 0.99 3400 21155
chr3 10182692 10193904 + VHL ENSG00000134086.7 10182692 0.76 0.99 3401 46571
chr3 10206549 10285427 + IRAK2 ENSG00000134070.4 10206549 0.82 0.99 3402 70428
chr3 10289707 10322902 + TATDN2 ENSG00000157014.6 10289707 0.67 0.97 3403 47004
chr3 10291056 10327480 + RP11-438J1.1 ENSG00000272410.1 10291056 0.88 0.81 3404 45655
chr3 10327359 10334631 - GHRL ENSG00000157017.11 10334631 0.98 0.99 3405 2080
Expression level of Genes
Back to top
miRNAs possibly regulated by vista39914[chr3:10236121-10236711]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results