EnhancerDB
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  3. rs79216420[chr3:10236242]
Enhancers that have rs79216420[chr3:10236242]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 10220648 10240655 enh20318
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr3 10236121 10236711 vista39914
VISTA
Transcript factors that have rs79216420[chr3:10236242]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 10236180 10236420 EGR1 UCSC Txn Factor no Conserved 108528166
chr3 10236230 10236245 LEF1 JASPAR yes 363125
chr3 10236230 10236245 LEF1 JASPAR yes 70935633
chr3 10236236 10236257 IRF1 JASPAR yes 363126
chr3 10236236 10236257 IRF1 JASPAR yes 70935634
chr3 10236241 10236256 MEF2A JASPAR yes 363127
chr3 10236241 10236256 MEF2A JASPAR yes 70935635
chr3 10236242 10236257 MEF2C JASPAR yes 363128
chr3 10236242 10236257 MEF2C JASPAR yes 70935636
Genes associated with rs79216420[chr3:10236242], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More