EnhancerDB
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  3. vista39979[chr3:12235782-12236012]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista39979[chr3:12235782-12236012]
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Tissue distribution of vista39979
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Transcription factor that possibly regulate vista39979[chr3:12235782-12236012]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 12235728 12236072 STAT3 UCSC Txn Factor no Conserved 108528226
chr3 12235752 12236042 CEBPB UCSC Txn Factor no Conserved 108528227
chr3 12235760 12236080 MAFK UCSC Txn Factor no Conserved 108528228
chr3 12235769 12236053 MAFF UCSC Txn Factor no Conserved 108528229
chr3 12235774 12236030 FOS UCSC Txn Factor no Conserved 108528230
chr3 12235785 12235795 NFATC3 JASPAR yes 462971
chr3 12235785 12235795 NFATC3 JASPAR yes 70938144
chr3 12235787 12235794 NFATC2 JASPAR yes 462972
chr3 12235787 12235794 NFATC2 JASPAR yes 70938145
chr3 12235788 12235803 STAT2 JASPAR yes 462973
chr3 12235788 12235803 STAT2 JASPAR yes 70938146
chr3 12235822 12235827 GATA2 JASPAR yes 462974
chr3 12235822 12235827 GATA2 JASPAR yes 70938147
chr3 12235833 12235846 ELF1 JASPAR yes 462975
chr3 12235833 12235846 ELF1 JASPAR yes 70938148
chr3 12235837 12235842 ETS2 TRANSFAC yes 462976
chr3 12235837 12235842 ETS2 TRANSFAC yes 70938149
chr3 12235837 12235845 FEV JASPAR yes 462977
chr3 12235837 12235845 FEV JASPAR yes 70938150
chr3 12235838 12235845 SPI1 JASPAR yes 462978
chr3 12235838 12235845 SPI1 JASPAR yes 70938151
chr3 12235857 12235868 YY2 JASPAR yes 462979
chr3 12235857 12235868 YY2 JASPAR yes 70938152
chr3 12235868 12235879 GCM1 JASPAR yes 462980
chr3 12235868 12235879 GCM1 JASPAR yes 70938153
chr3 12235878 12235896 SRF JASPAR yes 462981
chr3 12235878 12235896 SRF JASPAR yes 70938154
chr3 12235882 12235886 YY1 TRANSFAC yes 462982
chr3 12235882 12235886 YY1 TRANSFAC yes 70938155
chr3 12235884 12235895 STAT1 JASPAR yes 462983
chr3 12235884 12235895 STAT1 JASPAR yes 70938156
chr3 12235895 12235906 CEBPA JASPAR yes 462984
chr3 12235895 12235906 CEBPA JASPAR yes 70938157
chr3 12235896 12235906 NFIA JASPAR yes 462985
chr3 12235896 12235906 NFIA JASPAR yes 70938158
chr3 12235896 12235907 CEBPB JASPAR yes 462986
chr3 12235896 12235907 CEBPB JASPAR yes 70938159
chr3 12235898 12235904 NFIC JASPAR yes 462987
chr3 12235898 12235904 NFIC JASPAR yes 70938160
chr3 12235900 12235917 PAX1 JASPAR yes 462988
chr3 12235900 12235917 PAX9 JASPAR yes 462989
chr3 12235900 12235917 PAX1 JASPAR yes 70938161
chr3 12235900 12235917 PAX9 JASPAR yes 70938162
chr3 12235902 12235916 PAX6 JASPAR yes 462990
chr3 12235902 12235916 PAX6 JASPAR yes 70938163
chr3 12235914 12235935 MAFG JASPAR yes 462991
chr3 12235914 12235935 MAFG JASPAR yes 70938164
chr3 12235915 12235929 JUN JASPAR yes 462992
chr3 12235915 12235929 JUN JASPAR yes 70938165
chr3 12235918 12235929 FOSL2 JASPAR yes 462993
chr3 12235918 12235929 JUNB JASPAR yes 462994
chr3 12235918 12235929 FOSL2 JASPAR yes 70938166
chr3 12235918 12235929 JUNB JASPAR yes 70938167
chr3 12235919 12235930 FOS JASPAR yes 462995
chr3 12235919 12235930 FOSL1 JASPAR yes 462996
chr3 12235919 12235930 JUND JASPAR yes 462997
chr3 12235919 12235930 NFE2 JASPAR yes 462998
chr3 12235919 12235930 FOS JASPAR yes 70938168
chr3 12235919 12235930 FOSL1 JASPAR yes 70938169
chr3 12235919 12235930 JUND JASPAR yes 70938170
chr3 12235919 12235930 NFE2 JASPAR yes 70938171
chr3 12235919 12235937 MAFF JASPAR yes 462999
chr3 12235919 12235937 MAFF JASPAR yes 70938172
chr3 12235920 12235929 JDP2 JASPAR yes 463000
chr3 12235920 12235929 JDP2 JASPAR yes 70938173
chr3 12235920 12235931 JUNB JASPAR yes 463001
chr3 12235920 12235931 NFE2L2 JASPAR yes 463002
chr3 12235920 12235931 JUNB JASPAR yes 70938174
chr3 12235920 12235931 NFE2L2 JASPAR yes 70938175
chr3 12235920 12235934 JUN JASPAR yes 463003
chr3 12235920 12235934 JUN JASPAR yes 70938176
chr3 12235920 12235935 MAFK JASPAR yes 463004
chr3 12235920 12235935 MAFK JASPAR yes 70938177
chr3 12235921 12235932 BATF JASPAR yes 463005
chr3 12235921 12235932 BATF JASPAR yes 70938178
chr3 12235924 12235935 NRL JASPAR yes 463006
chr3 12235924 12235935 NRL JASPAR yes 70938179
chr3 12235926 12235942 SOX4 JASPAR yes 463007
chr3 12235926 12235942 SOX4 JASPAR yes 70938180
chr3 12235935 12235939 YY1 TRANSFAC yes 463008
chr3 12235935 12235939 YY1 TRANSFAC yes 70938181
chr3 12235945 12235949 YY1 TRANSFAC yes 463009
chr3 12235945 12235949 YY1 TRANSFAC yes 70938182
chr3 12235969 12235981 POU3F1 JASPAR yes 463010
chr3 12235969 12235981 POU3F1 JASPAR yes 70938183
chr3 12236002 12236006 ESR1 TRANSFAC yes 463011
chr3 12236002 12236006 ESR1 TRANSFAC yes 70938184
SNP sites on vista39979[chr3:12235782-12236012]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 12235790 rs59509627 GA G
CEBPB FOS MAFF MAFK NFATC2 NFATC3 STAT2 STAT3
6552996
chr3 12235835 rs571756606 CA C
CEBPB ELF1 FOS MAFF MAFK STAT3
6552997
chr3 12235870 rs111374234 A G
CEBPB FOS GCM1 MAFF MAFK STAT3
6552998
chr3 12235980 rs565397340 A G
CEBPB FOS MAFF MAFK POU3F1 STAT3
6552999
Genes possibly regulated by vista39979[chr3:12235782-12236012]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 12194551 12200851 - TIMP4 ENSG00000157150.4 12200851 0.96 0.95 3414 65069
chr3 12328867 12475855 + PPARG ENSG00000132170.15 12328867 0.9 1.0 3415 7145
Expression level of Genes
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miRNAs possibly regulated by vista39979[chr3:12235782-12236012]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results