EnhancerDB
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  3. rs59509627[chr3:12235790]
Enhancers that have rs59509627[chr3:12235790]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 12232819 12243015 enh20332
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus Epithelial (MCF-7)
chr3 12235782 12236012 vista39979
VISTA
Transcript factors that have rs59509627[chr3:12235790]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 12235728 12236072 STAT3 UCSC Txn Factor no Conserved 108528226
chr3 12235752 12236042 CEBPB UCSC Txn Factor no Conserved 108528227
chr3 12235760 12236080 MAFK UCSC Txn Factor no Conserved 108528228
chr3 12235769 12236053 MAFF UCSC Txn Factor no Conserved 108528229
chr3 12235774 12236030 FOS UCSC Txn Factor no Conserved 108528230
chr3 12235785 12235795 NFATC3 JASPAR yes 462971
chr3 12235785 12235795 NFATC3 JASPAR yes 70938144
chr3 12235787 12235794 NFATC2 JASPAR yes 462972
chr3 12235787 12235794 NFATC2 JASPAR yes 70938145
chr3 12235788 12235803 STAT2 JASPAR yes 462973
chr3 12235788 12235803 STAT2 JASPAR yes 70938146
Genes associated with rs59509627[chr3:12235790], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More