EnhancerDB
  1. Home
  2. Enhancers
  3. vista40024[chr3:13455554-13455885]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40024[chr3:13455554-13455885]
Back to top
Tissue distribution of vista40024
Back to top
Transcription factor that possibly regulate vista40024[chr3:13455554-13455885]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 13455467 13455805 SPI1 UCSC Txn Factor no Conserved 108528297
chr3 13455515 13455836 EBF1 UCSC Txn Factor no Conserved 108528298
chr3 13455545 13455556 NFKB1 JASPAR yes 546944
chr3 13455545 13455556 NFKB1 JASPAR yes 70940293
chr3 13455553 13455559 MZF1 JASPAR yes 546945
chr3 13455553 13455559 MZF1 JASPAR yes 70940294
chr3 13455578 13455591 SMAD2 JASPAR yes 546946
chr3 13455578 13455591 SMAD2 JASPAR yes 70940295
chr3 13455588 13455602 PLAG1 JASPAR yes 546947
chr3 13455588 13455602 PLAG1 JASPAR yes 70940296
chr3 13455613 13455619 ESR1 TRANSFAC yes 546948
chr3 13455613 13455619 ESR1 TRANSFAC yes 70940297
chr3 13455615 13455619 ESR1 TRANSFAC yes 546949
chr3 13455615 13455619 ESR1 TRANSFAC yes 70940298
chr3 13455616 13455626 SREBF2 JASPAR yes 546950
chr3 13455616 13455626 SREBF2 JASPAR yes 70940299
chr3 13455625 13455637 IRF1 JASPAR yes 546951
chr3 13455625 13455637 IRF1 JASPAR yes 70940300
chr3 13455626 13455647 IRF1 JASPAR yes 546952
chr3 13455626 13455647 IRF1 JASPAR yes 70940301
chr3 13455632 13455647 FOXP1 JASPAR yes 546953
chr3 13455632 13455647 FOXP1 JASPAR yes 70940302
chr3 13455632 13455653 IRF1 JASPAR yes 546954
chr3 13455632 13455653 IRF1 JASPAR yes 70940303
chr3 13455637 13455652 FOXP1 JASPAR yes 546955
chr3 13455637 13455652 FOXP1 JASPAR yes 70940304
chr3 13455637 13455658 IRF1 JASPAR yes 546956
chr3 13455637 13455658 IRF1 JASPAR yes 70940305
chr3 13455641 13455655 SPI1 JASPAR yes 546957
chr3 13455641 13455655 SPI1 JASPAR yes 70940306
chr3 13455641 13455656 STAT2 JASPAR yes 546958
chr3 13455641 13455656 STAT2 JASPAR yes 70940307
chr3 13455643 13455664 IRF1 JASPAR yes 546959
chr3 13455643 13455664 IRF1 JASPAR yes 70940308
chr3 13455647 13455662 PRDM1 JASPAR yes 546960
chr3 13455647 13455662 PRDM1 JASPAR yes 70940309
chr3 13455663 13455669 SOX10 JASPAR yes 546961
chr3 13455663 13455669 SOX10 JASPAR yes 70940310
chr3 13455673 13455693 RREB1 JASPAR yes 546962
chr3 13455673 13455693 RREB1 JASPAR yes 70940311
chr3 13455689 13455695 ZNF354C JASPAR yes 546963
chr3 13455689 13455695 ZNF354C JASPAR yes 70940312
chr3 13455694 13455706 PKNOX1 JASPAR yes 546964
chr3 13455694 13455706 PKNOX2 JASPAR yes 546965
chr3 13455694 13455706 TGIF1 JASPAR yes 546966
chr3 13455694 13455706 TGIF2 JASPAR yes 546967
chr3 13455694 13455706 PKNOX1 JASPAR yes 70940313
chr3 13455694 13455706 PKNOX2 JASPAR yes 70940314
chr3 13455694 13455706 TGIF1 JASPAR yes 70940315
chr3 13455694 13455706 TGIF2 JASPAR yes 70940316
chr3 13455696 13455716 RREB1 JASPAR yes 546968
chr3 13455696 13455716 RREB1 JASPAR yes 70940317
chr3 13455712 13455718 ZNF354C JASPAR yes 546969
chr3 13455712 13455718 ZNF354C JASPAR yes 70940318
chr3 13455724 13455728 H4TF2 TRANSFAC yes 546970
chr3 13455724 13455728 H4TF2 TRANSFAC yes 70940319
chr3 13455735 13455738 MYB TRANSFAC yes 546971
chr3 13455735 13455738 MYB TRANSFAC yes 70940320
chr3 13455741 13455753 TFAP2A JASPAR yes 546972
chr3 13455741 13455753 TFAP2B JASPAR yes 546973
chr3 13455741 13455753 TFAP2C JASPAR yes 546974
chr3 13455741 13455753 TFAP2A JASPAR yes 70940321
chr3 13455741 13455753 TFAP2B JASPAR yes 70940322
chr3 13455741 13455753 TFAP2C JASPAR yes 70940323
chr3 13455741 13455756 TFAP2A JASPAR yes 546975
chr3 13455741 13455756 TFAP2A JASPAR yes 70940324
chr3 13455763 13455773 ETV5 JASPAR yes 546976
chr3 13455763 13455773 GABPA JASPAR yes 546977
chr3 13455763 13455773 ETV5 JASPAR yes 70940325
chr3 13455763 13455773 GABPA JASPAR yes 70940326
chr3 13455765 13455771 ETS1 JASPAR yes 546978
chr3 13455765 13455771 SPI1 JASPAR yes 546979
chr3 13455765 13455771 ETS1 JASPAR yes 70940327
chr3 13455765 13455771 SPI1 JASPAR yes 70940328
chr3 13455814 13455820 SOX10 JASPAR yes 546980
chr3 13455814 13455820 SOX10 JASPAR yes 70940329
chr3 13455816 13455827 FLI1 JASPAR yes 546981
chr3 13455816 13455827 FLI1 JASPAR yes 70940330
chr3 13455817 13455822 ETS2 TRANSFAC yes 546982
chr3 13455817 13455822 ETS2 TRANSFAC yes 70940331
chr3 13455820 13455833 ELF1 JASPAR yes 546983
chr3 13455820 13455833 ELF1 JASPAR yes 70940332
chr3 13455821 13455833 EHF JASPAR yes 546984
chr3 13455821 13455833 EHF JASPAR yes 70940333
chr3 13455821 13455834 ELF3 JASPAR yes 546985
chr3 13455821 13455834 ELF3 JASPAR yes 70940334
chr3 13455822 13455833 ELF5 JASPAR yes 546986
chr3 13455822 13455833 ELF5 JASPAR yes 70940335
chr3 13455855 13455876 REST JASPAR yes 546987
chr3 13455855 13455876 REST JASPAR yes 70940336
chr3 13455859 13455863 H4TF2 TRANSFAC yes 546988
chr3 13455859 13455863 H4TF2 TRANSFAC yes 70940337
chr3 13455868 13455879 ELK4 JASPAR yes 546989
chr3 13455868 13455879 FLI1 JASPAR yes 546990
chr3 13455868 13455879 ELK4 JASPAR yes 70940338
chr3 13455868 13455879 FLI1 JASPAR yes 70940339
chr3 13455869 13455879 ETV6 JASPAR yes 546991
chr3 13455869 13455879 GABPA JASPAR yes 546992
chr3 13455869 13455879 ETV6 JASPAR yes 70940340
chr3 13455869 13455879 GABPA JASPAR yes 70940341
chr3 13455869 13455880 ELF5 JASPAR yes 546993
chr3 13455869 13455880 ELF5 JASPAR yes 70940342
chr3 13455869 13455881 EHF JASPAR yes 546994
chr3 13455869 13455881 ELF1 JASPAR yes 546995
chr3 13455869 13455881 ELF4 JASPAR yes 546996
chr3 13455869 13455881 EHF JASPAR yes 70940343
chr3 13455869 13455881 ELF1 JASPAR yes 70940344
chr3 13455869 13455881 ELF4 JASPAR yes 70940345
chr3 13455869 13455882 ELF1 JASPAR yes 546997
chr3 13455869 13455882 ELF1 JASPAR yes 70940346
chr3 13455869 13455884 STAT1 JASPAR yes 546998
chr3 13455869 13455884 STAT1 JASPAR yes 70940347
chr3 13455870 13455877 SPI1 JASPAR yes 546999
chr3 13455870 13455877 SPI1 JASPAR yes 70940348
chr3 13455870 13455878 EHF JASPAR yes 547000
chr3 13455870 13455878 FEV JASPAR yes 547001
chr3 13455870 13455878 EHF JASPAR yes 70940349
chr3 13455870 13455878 FEV JASPAR yes 70940350
chr3 13455871 13455882 STAT1 JASPAR yes 547002
chr3 13455871 13455882 STAT3 JASPAR yes 547003
chr3 13455871 13455882 STAT1 JASPAR yes 70940351
chr3 13455871 13455882 STAT3 JASPAR yes 70940352
SNP sites on vista40024[chr3:13455554-13455885]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 13455639 rs552465560 A G
EBF1 FOXP1 IRF1 SPI1
6562127
chr3 13455670 rs536984098 A G
EBF1 SPI1
6562128
chr3 13455768 rs74662041 G A
EBF1 ETS1 ETV5 GABPA SPI1
6562129
chr3 13455775 rs188748912 C T
EBF1 SPI1
6562130
Genes possibly regulated by vista40024[chr3:13455554-13455885]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 13357737 13461809 - NUP210 ENSG00000132182.7 13461809 0.82 1.0 3424 94076
chr3 13521224 13547916 + HDAC11 ENSG00000163517.10 13521224 0.68 1.0 3425 34661
Expression level of Genes
Back to top
miRNAs possibly regulated by vista40024[chr3:13455554-13455885]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results