EnhancerDB
  1. Home
  2. Enhancers
  3. vista40027[chr3:13493281-13493606]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40027[chr3:13493281-13493606]
Back to top
Tissue distribution of vista40027
Back to top
Transcription factor that possibly regulate vista40027[chr3:13493281-13493606]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 13492891 13493853 POLR2A UCSC Txn Factor no Conserved 108528305
chr3 13493125 13493629 GABPA UCSC Txn Factor no Conserved 108528306
chr3 13493136 13493601 MXI1 UCSC Txn Factor no Conserved 108528307
chr3 13493182 13493518 YY1 UCSC Txn Factor no Conserved 108528308
chr3 13493199 13493635 ELF1 UCSC Txn Factor no Conserved 108528309
chr3 13493302 13493470 IRF1 UCSC Txn Factor no Conserved 108528310
chr3 13493289 13493295 ETS1 JASPAR yes 549467
chr3 13493289 13493295 ETS1 JASPAR yes 70940491
chr3 13493330 13493342 ZBTB7A JASPAR yes 549468
chr3 13493330 13493342 ZBTB7A JASPAR yes 70940492
chr3 13493331 13493336 SP1 TRANSFAC yes 549469
chr3 13493331 13493336 SP1 TRANSFAC yes 70940493
chr3 13493331 13493343 ZBTB7C JASPAR yes 549470
chr3 13493331 13493343 ZBTB7C JASPAR yes 70940494
chr3 13493354 13493373 RFX2 JASPAR yes 549471
chr3 13493354 13493373 RFX2 JASPAR yes 70940495
chr3 13493358 13493374 RFX2 JASPAR yes 549472
chr3 13493358 13493374 RFX3 JASPAR yes 549473
chr3 13493358 13493374 RFX4 JASPAR yes 549474
chr3 13493358 13493374 RFX5 JASPAR yes 549475
chr3 13493358 13493374 RFX2 JASPAR yes 70940496
chr3 13493358 13493374 RFX3 JASPAR yes 70940497
chr3 13493358 13493374 RFX4 JASPAR yes 70940498
chr3 13493358 13493374 RFX5 JASPAR yes 70940499
chr3 13493359 13493378 RFX2 JASPAR yes 549476
chr3 13493359 13493378 RFX2 JASPAR yes 70940500
chr3 13493361 13493376 RFX5 JASPAR yes 549477
chr3 13493361 13493376 RFX5 JASPAR yes 70940501
chr3 13493371 13493384 ELF1 JASPAR yes 549478
chr3 13493371 13493384 ELF1 JASPAR yes 70940502
chr3 13493372 13493382 ELK1 JASPAR yes 549479
chr3 13493372 13493382 ELK1 JASPAR yes 70940503
chr3 13493372 13493384 EHF JASPAR yes 549480
chr3 13493372 13493384 ELF1 JASPAR yes 549481
chr3 13493372 13493384 ELF4 JASPAR yes 549482
chr3 13493372 13493384 EHF JASPAR yes 70940504
chr3 13493372 13493384 ELF1 JASPAR yes 70940505
chr3 13493372 13493384 ELF4 JASPAR yes 70940506
chr3 13493372 13493385 ELF3 JASPAR yes 549483
chr3 13493372 13493385 ELF3 JASPAR yes 70940507
chr3 13493373 13493384 ELF5 JASPAR yes 549484
chr3 13493373 13493384 SPDEF JASPAR yes 549485
chr3 13493373 13493384 ELF5 JASPAR yes 70940508
chr3 13493373 13493384 SPDEF JASPAR yes 70940509
chr3 13493374 13493383 ELK4 JASPAR yes 549486
chr3 13493374 13493383 ELK4 JASPAR yes 70940510
chr3 13493374 13493384 ELK1 JASPAR yes 549487
chr3 13493374 13493384 ELK3 JASPAR yes 549488
chr3 13493374 13493384 ETS1 JASPAR yes 549489
chr3 13493374 13493384 ETV1 JASPAR yes 549490
chr3 13493374 13493384 ETV3 JASPAR yes 549491
chr3 13493374 13493384 ETV4 JASPAR yes 549492
chr3 13493374 13493384 ETV5 JASPAR yes 549493
chr3 13493374 13493384 ETV6 JASPAR yes 549494
chr3 13493374 13493384 FEV JASPAR yes 549495
chr3 13493374 13493384 GABPA JASPAR yes 549496
chr3 13493374 13493384 ELK1 JASPAR yes 70940511
chr3 13493374 13493384 ELK3 JASPAR yes 70940512
chr3 13493374 13493384 ETS1 JASPAR yes 70940513
chr3 13493374 13493384 ETV1 JASPAR yes 70940514
chr3 13493374 13493384 ETV3 JASPAR yes 70940515
chr3 13493374 13493384 ETV4 JASPAR yes 70940516
chr3 13493374 13493384 ETV5 JASPAR yes 70940517
chr3 13493374 13493384 ETV6 JASPAR yes 70940518
chr3 13493374 13493384 FEV JASPAR yes 70940519
chr3 13493374 13493384 GABPA JASPAR yes 70940520
chr3 13493374 13493385 ELK4 JASPAR yes 549497
chr3 13493374 13493385 ELK4 JASPAR yes 70940521
chr3 13493375 13493383 FEV JASPAR yes 549498
chr3 13493375 13493383 FEV JASPAR yes 70940522
chr3 13493376 13493382 ETS1 JASPAR yes 549499
chr3 13493376 13493382 SPI1 JASPAR yes 549500
chr3 13493376 13493382 ETS1 JASPAR yes 70940523
chr3 13493376 13493382 SPI1 JASPAR yes 70940524
chr3 13493385 13493391 NFE2 TRANSFAC yes 549501
chr3 13493385 13493391 NFE2 TRANSFAC yes 70940525
chr3 13493385 13493397 INSM1 JASPAR yes 549502
chr3 13493385 13493397 INSM1 JASPAR yes 70940526
chr3 13493386 13493401 NR2C2 JASPAR yes 549503
chr3 13493386 13493401 NR2C2 JASPAR yes 70940527
chr3 13493390 13493406 RFX5 JASPAR yes 549504
chr3 13493390 13493406 RFX5 JASPAR yes 70940528
chr3 13493391 13493410 RFX2 JASPAR yes 549505
chr3 13493391 13493410 RFX2 JASPAR yes 70940529
chr3 13493401 13493415 SPIC JASPAR yes 549506
chr3 13493401 13493415 SPIC JASPAR yes 70940530
chr3 13493402 13493415 ELF1 JASPAR yes 549507
chr3 13493402 13493415 ELF1 JASPAR yes 70940531
chr3 13493403 13493413 ELK1 JASPAR yes 549508
chr3 13493403 13493413 ELK1 JASPAR yes 70940532
chr3 13493403 13493415 EHF JASPAR yes 549509
chr3 13493403 13493415 ELF1 JASPAR yes 549510
chr3 13493403 13493415 ELF4 JASPAR yes 549511
chr3 13493403 13493415 EHF JASPAR yes 70940533
chr3 13493403 13493415 ELF1 JASPAR yes 70940534
chr3 13493403 13493415 ELF4 JASPAR yes 70940535
chr3 13493404 13493415 ETV2 JASPAR yes 549512
chr3 13493404 13493415 ETV2 JASPAR yes 70940536
chr3 13493405 13493414 ELK4 JASPAR yes 549513
chr3 13493405 13493414 ELK4 JASPAR yes 70940537
chr3 13493405 13493415 ELK1 JASPAR yes 549514
chr3 13493405 13493415 ELK3 JASPAR yes 549515
chr3 13493405 13493415 ERF JASPAR yes 549516
chr3 13493405 13493415 ERG JASPAR yes 549517
chr3 13493405 13493415 ETS1 JASPAR yes 549518
chr3 13493405 13493415 ETV1 JASPAR yes 549519
chr3 13493405 13493415 ETV3 JASPAR yes 549520
chr3 13493405 13493415 ETV4 JASPAR yes 549521
chr3 13493405 13493415 ETV5 JASPAR yes 549522
chr3 13493405 13493415 ETV6 JASPAR yes 549523
chr3 13493405 13493415 FEV JASPAR yes 549524
chr3 13493405 13493415 FLI1 JASPAR yes 549525
chr3 13493405 13493415 GABPA JASPAR yes 549526
chr3 13493405 13493415 ELK1 JASPAR yes 70940538
chr3 13493405 13493415 ELK3 JASPAR yes 70940539
chr3 13493405 13493415 ERF JASPAR yes 70940540
chr3 13493405 13493415 ERG JASPAR yes 70940541
chr3 13493405 13493415 ETS1 JASPAR yes 70940542
chr3 13493405 13493415 ETV1 JASPAR yes 70940543
chr3 13493405 13493415 ETV3 JASPAR yes 70940544
chr3 13493405 13493415 ETV4 JASPAR yes 70940545
chr3 13493405 13493415 ETV5 JASPAR yes 70940546
chr3 13493405 13493415 ETV6 JASPAR yes 70940547
chr3 13493405 13493415 FEV JASPAR yes 70940548
chr3 13493405 13493415 FLI1 JASPAR yes 70940549
chr3 13493405 13493415 GABPA JASPAR yes 70940550
chr3 13493405 13493416 ELK4 JASPAR yes 549527
chr3 13493405 13493416 FLI1 JASPAR yes 549528
chr3 13493405 13493416 ELK4 JASPAR yes 70940551
chr3 13493405 13493416 FLI1 JASPAR yes 70940552
chr3 13493406 13493414 FEV JASPAR yes 549529
chr3 13493406 13493414 FEV JASPAR yes 70940553
chr3 13493407 13493413 ETS1 JASPAR yes 549530
chr3 13493407 13493413 SPI1 JASPAR yes 549531
chr3 13493407 13493413 ETS1 JASPAR yes 70940554
chr3 13493407 13493413 SPI1 JASPAR yes 70940555
chr3 13493408 13493418 NFKB1 JASPAR yes 549532
chr3 13493408 13493418 REL JASPAR yes 549533
chr3 13493408 13493418 NFKB1 JASPAR yes 70940556
chr3 13493408 13493418 REL JASPAR yes 70940557
chr3 13493411 13493422 E2F4 JASPAR yes 549534
chr3 13493411 13493422 E2F6 JASPAR yes 549535
chr3 13493411 13493422 E2F4 JASPAR yes 70940558
chr3 13493411 13493422 E2F6 JASPAR yes 70940559
chr3 13493412 13493423 E2F1 JASPAR yes 549536
chr3 13493412 13493423 E2F1 JASPAR yes 70940560
chr3 13493412 13493424 E2F8 JASPAR yes 549537
chr3 13493412 13493424 E2F8 JASPAR yes 70940561
chr3 13493416 13493421 SP1 TRANSFAC yes 549538
chr3 13493416 13493421 SP1 TRANSFAC yes 70940562
chr3 13493424 13493439 HSF1 JASPAR yes 549539
chr3 13493424 13493439 HSF1 JASPAR yes 70940563
chr3 13493425 13493438 HSF4 JASPAR yes 549540
chr3 13493425 13493438 HSF4 JASPAR yes 70940564
chr3 13493452 13493462 ALX3 JASPAR yes 549541
chr3 13493452 13493462 EMX1 JASPAR yes 549542
chr3 13493452 13493462 EMX2 JASPAR yes 549543
chr3 13493452 13493462 EN2 JASPAR yes 549544
chr3 13493452 13493462 ESX1 JASPAR yes 549545
chr3 13493452 13493462 EVX1 JASPAR yes 549546
chr3 13493452 13493462 EVX2 JASPAR yes 549547
chr3 13493452 13493462 GBX1 JASPAR yes 549548
chr3 13493452 13493462 GBX2 JASPAR yes 549549
chr3 13493452 13493462 GSX1 JASPAR yes 549550
chr3 13493452 13493462 GSX2 JASPAR yes 549551
chr3 13493452 13493462 HESX1 JASPAR yes 549552
chr3 13493452 13493462 HOXA2 JASPAR yes 549553
chr3 13493452 13493462 HOXB2 JASPAR yes 549554
chr3 13493452 13493462 HOXB3 JASPAR yes 549555
chr3 13493452 13493462 LBX2 JASPAR yes 549556
chr3 13493452 13493462 LHX2 JASPAR yes 549557
chr3 13493452 13493462 LHX6 JASPAR yes 549558
chr3 13493452 13493462 MEOX1 JASPAR yes 549559
chr3 13493452 13493462 MEOX2 JASPAR yes 549560
chr3 13493452 13493462 MIXL1 JASPAR yes 549561
chr3 13493452 13493462 MNX1 JASPAR yes 549562
chr3 13493452 13493462 NOTO JASPAR yes 549563
chr3 13493452 13493462 POU6F1 JASPAR yes 549564
chr3 13493452 13493462 RAX JASPAR yes 549565
chr3 13493452 13493462 ALX3 JASPAR yes 70940565
chr3 13493452 13493462 EMX1 JASPAR yes 70940566
chr3 13493452 13493462 EMX2 JASPAR yes 70940567
chr3 13493452 13493462 EN2 JASPAR yes 70940568
chr3 13493452 13493462 ESX1 JASPAR yes 70940569
chr3 13493452 13493462 EVX1 JASPAR yes 70940570
chr3 13493452 13493462 EVX2 JASPAR yes 70940571
chr3 13493452 13493462 GBX1 JASPAR yes 70940572
chr3 13493452 13493462 GBX2 JASPAR yes 70940573
chr3 13493452 13493462 GSX1 JASPAR yes 70940574
chr3 13493452 13493462 GSX2 JASPAR yes 70940575
chr3 13493452 13493462 HESX1 JASPAR yes 70940576
chr3 13493452 13493462 HOXA2 JASPAR yes 70940577
chr3 13493452 13493462 HOXB2 JASPAR yes 70940578
chr3 13493452 13493462 HOXB3 JASPAR yes 70940579
chr3 13493452 13493462 LBX2 JASPAR yes 70940580
chr3 13493452 13493462 LHX2 JASPAR yes 70940581
chr3 13493452 13493462 LHX6 JASPAR yes 70940582
chr3 13493452 13493462 MEOX1 JASPAR yes 70940583
chr3 13493452 13493462 MEOX2 JASPAR yes 70940584
chr3 13493452 13493462 MIXL1 JASPAR yes 70940585
chr3 13493452 13493462 MNX1 JASPAR yes 70940586
chr3 13493452 13493462 NOTO JASPAR yes 70940587
chr3 13493452 13493462 POU6F1 JASPAR yes 70940588
chr3 13493452 13493462 RAX JASPAR yes 70940589
chr3 13493453 13493461 BSX JASPAR yes 549566
chr3 13493453 13493461 DLX6 JASPAR yes 549567
chr3 13493453 13493461 EN1 JASPAR yes 549568
chr3 13493453 13493461 ISX JASPAR yes 549569
chr3 13493453 13493461 LBX1 JASPAR yes 549570
chr3 13493453 13493461 LHX9 JASPAR yes 549571
chr3 13493453 13493461 LMX1A JASPAR yes 549572
chr3 13493453 13493461 LMX1B JASPAR yes 549573
chr3 13493453 13493461 NKX6-1 JASPAR yes 549574
chr3 13493453 13493461 NKX6-2 JASPAR yes 549575
chr3 13493453 13493461 PAX4 JASPAR yes 549576
chr3 13493453 13493461 PDX1 JASPAR yes 549577
chr3 13493453 13493461 PRRX1 JASPAR yes 549578
chr3 13493453 13493461 RAX2 JASPAR yes 549579
chr3 13493453 13493461 SHOX JASPAR yes 549580
chr3 13493453 13493461 UNCX JASPAR yes 549581
chr3 13493453 13493461 VAX1 JASPAR yes 549582
chr3 13493453 13493461 VAX2 JASPAR yes 549583
chr3 13493453 13493461 VSX1 JASPAR yes 549584
chr3 13493453 13493461 VSX2 JASPAR yes 549585
chr3 13493453 13493461 BSX JASPAR yes 70940590
chr3 13493453 13493461 DLX6 JASPAR yes 70940591
chr3 13493453 13493461 EN1 JASPAR yes 70940592
chr3 13493453 13493461 ISX JASPAR yes 70940593
chr3 13493453 13493461 LBX1 JASPAR yes 70940594
chr3 13493453 13493461 LHX9 JASPAR yes 70940595
chr3 13493453 13493461 LMX1A JASPAR yes 70940596
chr3 13493453 13493461 LMX1B JASPAR yes 70940597
chr3 13493453 13493461 NKX6-1 JASPAR yes 70940598
chr3 13493453 13493461 NKX6-2 JASPAR yes 70940599
chr3 13493453 13493461 PAX4 JASPAR yes 70940600
chr3 13493453 13493461 PDX1 JASPAR yes 70940601
chr3 13493453 13493461 PRRX1 JASPAR yes 70940602
chr3 13493453 13493461 RAX2 JASPAR yes 70940603
chr3 13493453 13493461 SHOX JASPAR yes 70940604
chr3 13493453 13493461 UNCX JASPAR yes 70940605
chr3 13493453 13493461 VAX1 JASPAR yes 70940606
chr3 13493453 13493461 VAX2 JASPAR yes 70940607
chr3 13493453 13493461 VSX1 JASPAR yes 70940608
chr3 13493453 13493461 VSX2 JASPAR yes 70940609
chr3 13493453 13493463 POU6F2 JASPAR yes 549586
chr3 13493453 13493463 POU6F2 JASPAR yes 70940610
chr3 13493453 13493467 POU1F1 JASPAR yes 549587
chr3 13493453 13493467 POU1F1 JASPAR yes 70940611
chr3 13493454 13493466 POU3F1 JASPAR yes 549588
chr3 13493454 13493466 POU3F2 JASPAR yes 549589
chr3 13493454 13493466 POU3F1 JASPAR yes 70940612
chr3 13493454 13493466 POU3F2 JASPAR yes 70940613
chr3 13493454 13493467 POU3F3 JASPAR yes 549590
chr3 13493454 13493467 POU3F3 JASPAR yes 70940614
chr3 13493455 13493467 POU2F1 JASPAR yes 549591
chr3 13493455 13493467 POU2F1 JASPAR yes 70940615
chr3 13493456 13493465 POU3F4 JASPAR yes 549592
chr3 13493456 13493465 POU5F1B JASPAR yes 549593
chr3 13493456 13493465 POU3F4 JASPAR yes 70940616
chr3 13493456 13493465 POU5F1B JASPAR yes 70940617
chr3 13493475 13493489 RORA JASPAR yes 549594
chr3 13493475 13493489 RORA JASPAR yes 70940618
chr3 13493478 13493490 FOXI1 JASPAR yes 549595
chr3 13493478 13493490 FOXI1 JASPAR yes 70940619
chr3 13493498 13493504 NFE2 TRANSFAC yes 549596
chr3 13493498 13493504 NFE2 TRANSFAC yes 70940620
chr3 13493523 13493538 RFX5 JASPAR yes 549597
chr3 13493523 13493538 RFX5 JASPAR yes 70940621
chr3 13493583 13493604 MAFG JASPAR yes 549598
chr3 13493583 13493604 MAFG JASPAR yes 70940622
chr3 13493588 13493606 MAFF JASPAR yes 549599
chr3 13493588 13493606 MAFF JASPAR yes 70940623
chr3 13493598 13493608 MSC JASPAR yes 549600
chr3 13493598 13493608 MSC JASPAR yes 70940624
chr3 13493602 13493613 FOXP2 JASPAR yes 549601
chr3 13493602 13493613 FOXP2 JASPAR yes 70940625
SNP sites on vista40027[chr3:13493281-13493606]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 13493297 rs144602802 TGAG T
ELF1 GABPA MXI1 POLR2A YY1
6562385
chr3 13493297 rs867864256 TGAG T
ELF1 GABPA MXI1 POLR2A YY1
6562386
chr3 13493316 rs529279040 C G,T
ELF1 GABPA IRF1 MXI1 POLR2A YY1
6562387
chr3 13493373 rs114106665 C T
EHF ELF1 ELF3 ELF4 ELF5 ELK1 GABPA IRF1 MXI1 POLR2A RFX2 RFX3 RFX4 RFX5 SPDEF YY1
6562388
chr3 13493478 rs551972558 G A
ELF1 FOXI1 GABPA MXI1 POLR2A RORA YY1
6562389
chr3 13493502 rs76467229 C A,T
ELF1 GABPA MXI1 NFE2 POLR2A YY1
6562390
chr3 13493504 rs111247592 C T
ELF1 GABPA MXI1 NFE2 POLR2A YY1
6562391
chr3 13493508 rs2597519 C A
ELF1 GABPA MXI1 POLR2A YY1
6562392
chr3 13493530 rs6772834 C A
ELF1 GABPA MXI1 POLR2A RFX5
6562393
Genes possibly regulated by vista40027[chr3:13493281-13493606]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 13357737 13461809 - NUP210 ENSG00000132182.7 13461809 0.82 1.0 3424 68528
chr3 13521224 13547916 + HDAC11 ENSG00000163517.10 13521224 0.68 1.0 3425 72382
chr3 13573824 13679922 + FBLN2 ENSG00000163520.9 13573824 0.83 0.99 3426 19782
Expression level of Genes
Back to top
miRNAs possibly regulated by vista40027[chr3:13493281-13493606]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results