EnhancerDB
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  3. rs551972558[chr3:13493478]
Enhancers that have rs551972558[chr3:13493478]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 13490805 13500815 enh7016
Liver (HepG2) Large Intestine Prostate (RWPE1) Esophagus Bone (Osteoblast) Colon (HCT116) Blood (Karpas-422) Uterus Epithelial (MCF-7)
chr3 13493281 13493606 vista40027
VISTA
Transcript factors that have rs551972558[chr3:13493478]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 13492891 13493853 POLR2A UCSC Txn Factor no Conserved 108528305
chr3 13493125 13493629 GABPA UCSC Txn Factor no Conserved 108528306
chr3 13493136 13493601 MXI1 UCSC Txn Factor no Conserved 108528307
chr3 13493182 13493518 YY1 UCSC Txn Factor no Conserved 108528308
chr3 13493199 13493635 ELF1 UCSC Txn Factor no Conserved 108528309
chr3 13493475 13493489 RORA JASPAR yes 549594
chr3 13493475 13493489 RORA JASPAR yes 70940618
chr3 13493478 13493490 FOXI1 JASPAR yes 549595
chr3 13493478 13493490 FOXI1 JASPAR yes 70940619
Genes associated with rs551972558[chr3:13493478], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More