EnhancerDB
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  3. vista4003[chr1:176601179-176601401]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4003[chr1:176601179-176601401]
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Tissue distribution of vista4003
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Transcription factor that possibly regulate vista4003[chr1:176601179-176601401]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 176601181 176601191 POU6F2 JASPAR yes 118404109
chr1 176601183 176601191 NKX6-1 JASPAR yes 118404110
chr1 176601183 176601191 NKX6-2 JASPAR yes 118404111
chr1 176601185 176601189 YY1 TRANSFAC yes 118404112
chr1 176601218 176601228 TEAD1 JASPAR yes 118404113
chr1 176601218 176601228 TEAD4 JASPAR yes 118404114
chr1 176601268 176601289 ZNF263 JASPAR yes 118404115
chr1 176601271 176601282 FLI1 JASPAR yes 118404116
chr1 176601272 176601277 ETS2 TRANSFAC yes 118404117
chr1 176601272 176601280 FEV JASPAR yes 118404118
chr1 176601320 176601326 HiNF-A TRANSFAC yes 118404119
chr1 176601348 176601352 H1TF2 TRANSFAC yes 118404120
chr1 176601348 176601352 NFE TRANSFAC yes 118404121
chr1 176601348 176601352 SRF TRANSFAC yes 118404122
chr1 176601350 176601360 EMX1 JASPAR yes 118404123
chr1 176601350 176601360 EMX2 JASPAR yes 118404124
chr1 176601350 176601360 GSX1 JASPAR yes 118404125
chr1 176601350 176601360 HOXB3 JASPAR yes 118404126
chr1 176601350 176601360 LHX2 JASPAR yes 118404127
chr1 176601350 176601360 LHX6 JASPAR yes 118404128
chr1 176601350 176601360 MEOX1 JASPAR yes 118404129
chr1 176601350 176601360 MEOX2 JASPAR yes 118404130
chr1 176601350 176601360 POU6F1 JASPAR yes 118404131
chr1 176601350 176601366 SOX8 JASPAR yes 118404132
chr1 176601351 176601359 LBX1 JASPAR yes 118404133
chr1 176601351 176601359 PDX1 JASPAR yes 118404134
chr1 176601351 176601359 VAX1 JASPAR yes 118404135
chr1 176601351 176601359 VAX2 JASPAR yes 118404136
chr1 176601351 176601359 VSX1 JASPAR yes 118404137
chr1 176601351 176601359 VSX2 JASPAR yes 118404138
chr1 176601351 176601361 POU6F2 JASPAR yes 118404139
chr1 176601361 176601381 RREB1 JASPAR yes 118404140
chr1 176601365 176601385 RREB1 JASPAR yes 118404141
chr1 176601367 176601387 RREB1 JASPAR yes 118404142
chr1 176601369 176601389 RREB1 JASPAR yes 118404143
chr1 176601371 176601391 RREB1 JASPAR yes 118404144
chr1 176601373 176601393 RREB1 JASPAR yes 118404145
chr1 176601375 176601395 RREB1 JASPAR yes 118404146
chr1 176601377 176601397 RREB1 JASPAR yes 118404147
chr1 176601379 176601399 RREB1 JASPAR yes 118404148
chr1 176601381 176601401 RREB1 JASPAR yes 118404149
SNP sites on vista4003[chr1:176601179-176601401]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 176601187 rs10913223 A G
NKX6-1 NKX6-2 POU6F2 YY1
746834
chr1 176601365 rs12134567 A G
RREB1 SOX8
746835
chr1 176601366 rs569224111 TGTG T
RREB1 SOX8
746836
chr1 176601400 rs566600885 A T
RREB1
746837
Genes possibly regulated by vista4003[chr1:176601179-176601401]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista4003[chr1:176601179-176601401]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr1 176998510 176998530 - hsa-miR-488-3p MIMAT0004763 177133842 0.14546649273049322 0.821413 0.0 100
Expression level of miRNAs
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