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- rs566600885[chr1:176601400]
Enhancers that have rs566600885[chr1:176601400]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
176601179 |
176601401 |
vista4003 |
|
|
Transcript factors that have rs566600885[chr1:176601400]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
176601127
|
176601906
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
107847187
|
|
|
chr1
|
176601150
|
176601535
|
SOX2
|
GTRD
|
no
|
Neural Stem Cells (H9)
|
107847188
|
|
|
chr1
|
176601166
|
176601935
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
107847189
|
|
|
chr1
|
176601206
|
176601882
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
107847190
|
|
|
chr1
|
176601218
|
176601893
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
107847191
|
|
|
chr1
|
176601340
|
176601842
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
107847192
|
|
|
chr1
|
176601381
|
176601401
|
RREB1
|
JASPAR
|
yes
|
|
118404149
|
|
Genes associated with rs566600885[chr1:176601400], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |