EnhancerDB
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  3. vista40116[chr3:15835826-15836097]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40116[chr3:15835826-15836097]
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Tissue distribution of vista40116
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Transcription factor that possibly regulate vista40116[chr3:15835826-15836097]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 15835781 15837768 POLR2A UCSC Txn Factor no Conserved 108528391
chr3 15835787 15836149 RUNX3 UCSC Txn Factor no Conserved 108528392
chr3 15835830 15835851 IRF1 JASPAR yes 679910
chr3 15835830 15835851 IRF1 JASPAR yes 70944930
chr3 15835834 15835840 TBP TRANSFAC yes 679911
chr3 15835834 15835840 TBP TRANSFAC yes 70944931
chr3 15835838 15835852 SPIC JASPAR yes 679912
chr3 15835838 15835852 SPIC JASPAR yes 70944932
chr3 15835845 15835851 PEA3 TRANSFAC yes 679913
chr3 15835845 15835851 PEA3 TRANSFAC yes 70944933
chr3 15835849 15835864 PRDM1 JASPAR yes 679914
chr3 15835849 15835864 PRDM1 JASPAR yes 70944934
chr3 15835892 15835907 RUNX2 JASPAR yes 679915
chr3 15835892 15835907 RUNX2 JASPAR yes 70944935
chr3 15835893 15835902 RUNX2 JASPAR yes 679916
chr3 15835893 15835902 RUNX2 JASPAR yes 70944936
chr3 15835893 15835903 RUNX3 JASPAR yes 679917
chr3 15835893 15835903 RUNX3 JASPAR yes 70944937
chr3 15835893 15835904 RUNX1 JASPAR yes 679918
chr3 15835893 15835904 RUNX1 JASPAR yes 70944938
chr3 15835903 15835907 YY1 TRANSFAC yes 679919
chr3 15835903 15835907 YY1 TRANSFAC yes 70944939
chr3 15835903 15835917 RORA JASPAR yes 679920
chr3 15835903 15835917 RORA JASPAR yes 70944940
chr3 15835906 15835916 RORA JASPAR yes 679921
chr3 15835906 15835916 RORA JASPAR yes 70944941
chr3 15835907 15835918 ESRRB JASPAR yes 679922
chr3 15835907 15835918 ESRRB JASPAR yes 70944942
chr3 15835911 15835915 ESR1 TRANSFAC yes 679923
chr3 15835911 15835915 ESR1 TRANSFAC yes 70944943
chr3 15835922 15835941 RFX2 JASPAR yes 679924
chr3 15835922 15835941 RFX2 JASPAR yes 70944944
chr3 15835926 15835942 RFX2 JASPAR yes 679925
chr3 15835926 15835942 RFX3 JASPAR yes 679926
chr3 15835926 15835942 RFX4 JASPAR yes 679927
chr3 15835926 15835942 RFX5 JASPAR yes 679928
chr3 15835926 15835942 RFX2 JASPAR yes 70944945
chr3 15835926 15835942 RFX3 JASPAR yes 70944946
chr3 15835926 15835942 RFX4 JASPAR yes 70944947
chr3 15835926 15835942 RFX5 JASPAR yes 70944948
chr3 15835927 15835946 RFX2 JASPAR yes 679929
chr3 15835927 15835946 RFX2 JASPAR yes 70944949
chr3 15835940 15835946 SOX10 JASPAR yes 679930
chr3 15835940 15835946 SOX10 JASPAR yes 70944950
chr3 15835943 15835954 FOS JASPAR yes 679931
chr3 15835943 15835954 FOSL1 JASPAR yes 679932
chr3 15835943 15835954 JUND JASPAR yes 679933
chr3 15835943 15835954 FOS JASPAR yes 70944951
chr3 15835943 15835954 FOSL1 JASPAR yes 70944952
chr3 15835943 15835954 JUND JASPAR yes 70944953
chr3 15835945 15835951 JUN TRANSFAC yes 679934
chr3 15835945 15835951 JUN TRANSFAC yes 70944954
chr3 15835948 15835958 TFEB JASPAR yes 679935
chr3 15835948 15835958 TFEC JASPAR yes 679936
chr3 15835948 15835958 TFEB JASPAR yes 70944955
chr3 15835948 15835958 TFEC JASPAR yes 70944956
chr3 15835948 15835959 USF1 JASPAR yes 679937
chr3 15835948 15835959 USF1 JASPAR yes 70944957
chr3 15835954 15835968 RXRB JASPAR yes 679938
chr3 15835954 15835968 RXRG JASPAR yes 679939
chr3 15835954 15835968 RXRB JASPAR yes 70944958
chr3 15835954 15835968 RXRG JASPAR yes 70944959
chr3 15835954 15835969 NR2C2 JASPAR yes 679940
chr3 15835954 15835969 NR2C2 JASPAR yes 70944960
chr3 15835965 15835971 SP1 TRANSFAC yes 679941
chr3 15835965 15835971 SP1 TRANSFAC yes 70944961
chr3 15835973 15835976 MYB TRANSFAC yes 679942
chr3 15835973 15835976 MYB TRANSFAC yes 70944962
chr3 15835986 15835990 YY1 TRANSFAC yes 679943
chr3 15835986 15835990 YY1 TRANSFAC yes 70944963
chr3 15835990 15836005 STAT1 JASPAR yes 679944
chr3 15835990 15836005 STAT1 JASPAR yes 70944964
chr3 15835992 15836003 STAT1 JASPAR yes 679945
chr3 15835992 15836003 STAT3 JASPAR yes 679946
chr3 15835992 15836003 STAT1 JASPAR yes 70944965
chr3 15835992 15836003 STAT3 JASPAR yes 70944966
chr3 15835994 15836005 HOXC13 JASPAR yes 679947
chr3 15835994 15836005 HOXC13 JASPAR yes 70944967
chr3 15836004 15836015 FOXB1 JASPAR yes 679948
chr3 15836004 15836015 FOXB1 JASPAR yes 70944968
chr3 15836011 15836015 YY1 TRANSFAC yes 679949
chr3 15836011 15836015 YY1 TRANSFAC yes 70944969
chr3 15836011 15836019 HOXA5 JASPAR yes 679950
chr3 15836011 15836019 HOXA5 JASPAR yes 70944970
chr3 15836016 15836022 ZNF354C JASPAR yes 679951
chr3 15836016 15836022 ZNF354C JASPAR yes 70944971
chr3 15836023 15836034 PROP1 JASPAR yes 679952
chr3 15836023 15836034 PROP1 JASPAR yes 70944972
chr3 15836026 15836032 TCF4 TRANSFAC yes 679953
chr3 15836026 15836032 TCF4 TRANSFAC yes 70944973
chr3 15836034 15836051 NR3C1 JASPAR yes 679954
chr3 15836034 15836051 NR3C2 JASPAR yes 679955
chr3 15836034 15836051 NR3C1 JASPAR yes 70944974
chr3 15836034 15836051 NR3C2 JASPAR yes 70944975
chr3 15836034 15836052 NR3C1 JASPAR yes 679956
chr3 15836034 15836052 NR3C1 JASPAR yes 70944976
chr3 15836036 15836044 GMEB2 JASPAR yes 679957
chr3 15836036 15836044 GMEB2 JASPAR yes 70944977
chr3 15836061 15836071 HMBOX1 JASPAR yes 679958
chr3 15836061 15836071 HMBOX1 JASPAR yes 70944978
chr3 15836095 15836098 MYB TRANSFAC yes 679959
chr3 15836095 15836098 MYB TRANSFAC yes 70944979
SNP sites on vista40116[chr3:15835826-15836097]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 15835835 rs113829237 T TA,TAA
IRF1 POLR2A RUNX3 TBP
6577219
chr3 15835835 rs57325392 T TA,TAA
IRF1 POLR2A RUNX3 TBP
6577220
chr3 15835899 rs146929107 A G
POLR2A RUNX1 RUNX2 RUNX3
6577221
chr3 15835918 rs137959895 C G
ESRRB POLR2A RUNX3
6577222
chr3 15835968 rs186146227 C A,T
NR2C2 POLR2A RUNX3 RXRB RXRG SP1
6577223
chr3 15835996 rs376314442 C T
HOXC13 POLR2A RUNX3 STAT1 STAT3
6577224
chr3 15836096 rs34567683 TA T
MYB POLR2A RUNX3
6577225
chr3 15836096 rs397988803 TA T
MYB POLR2A RUNX3
6577226
Genes possibly regulated by vista40116[chr3:15835826-15836097]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr3 15708743 15901278 - ANKRD28 ENSG00000206560.6 15901278 0.66 0.99 3448 34819
Expression level of Genes
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miRNAs possibly regulated by vista40116[chr3:15835826-15836097]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results