EnhancerDB
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  3. rs186146227[chr3:15835968]
Enhancers that have rs186146227[chr3:15835968]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 15833807 15853475 enh7024
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Uterus Epithelial (MCF-7)
chr3 15835826 15836097 vista40116
VISTA
Transcript factors that have rs186146227[chr3:15835968]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 15835781 15837768 POLR2A UCSC Txn Factor no Conserved 108528391
chr3 15835787 15836149 RUNX3 UCSC Txn Factor no Conserved 108528392
chr3 15835954 15835968 RXRB JASPAR yes 679938
chr3 15835954 15835968 RXRG JASPAR yes 679939
chr3 15835954 15835968 RXRB JASPAR yes 70944958
chr3 15835954 15835968 RXRG JASPAR yes 70944959
chr3 15835954 15835969 NR2C2 JASPAR yes 679940
chr3 15835954 15835969 NR2C2 JASPAR yes 70944960
chr3 15835965 15835971 SP1 TRANSFAC yes 679941
chr3 15835965 15835971 SP1 TRANSFAC yes 70944961
Genes associated with rs186146227[chr3:15835968], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More