EnhancerDB
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  3. vista40124[chr3:16102393-16102705]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista40124[chr3:16102393-16102705]
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Tissue distribution of vista40124
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Transcription factor that possibly regulate vista40124[chr3:16102393-16102705]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr3 16101855 16102472 BCL3 UCSC Txn Factor no Conserved 108528420
chr3 16101855 16102472 BCL3 UCSC Txn Factor no Conserved 108528421
chr3 16102394 16102409 FOXP1 JASPAR yes 696459
chr3 16102394 16102409 FOXP1 JASPAR yes 70945494
chr3 16102395 16102410 FOXP1 JASPAR yes 696460
chr3 16102395 16102410 FOXP1 JASPAR yes 70945495
chr3 16102395 16102416 IRF1 JASPAR yes 696461
chr3 16102395 16102416 IRF1 JASPAR yes 70945496
chr3 16102396 16102411 FOXP1 JASPAR yes 696462
chr3 16102396 16102411 FOXP1 JASPAR yes 70945497
chr3 16102396 16102417 IRF1 JASPAR yes 696463
chr3 16102396 16102417 IRF1 JASPAR yes 70945498
chr3 16102397 16102412 FOXP1 JASPAR yes 696464
chr3 16102397 16102412 FOXP1 JASPAR yes 70945499
chr3 16102399 16102414 FOXP1 JASPAR yes 696465
chr3 16102399 16102414 FOXP1 JASPAR yes 70945500
chr3 16102400 16102421 IRF1 JASPAR yes 696466
chr3 16102400 16102421 IRF1 JASPAR yes 70945501
chr3 16102401 16102416 FOXP1 JASPAR yes 696467
chr3 16102401 16102416 FOXP1 JASPAR yes 70945502
chr3 16102401 16102422 IRF1 JASPAR yes 696468
chr3 16102401 16102422 IRF1 JASPAR yes 70945503
chr3 16102402 16102423 IRF1 JASPAR yes 696469
chr3 16102402 16102423 IRF1 JASPAR yes 70945504
chr3 16102405 16102426 IRF1 JASPAR yes 696470
chr3 16102405 16102426 IRF1 JASPAR yes 70945505
chr3 16102406 16102421 FOXP1 JASPAR yes 696471
chr3 16102406 16102421 FOXP1 JASPAR yes 70945506
chr3 16102409 16102430 IRF1 JASPAR yes 696472
chr3 16102409 16102430 IRF1 JASPAR yes 70945507
chr3 16102410 16102425 FOXP1 JASPAR yes 696473
chr3 16102410 16102425 FOXP1 JASPAR yes 70945508
chr3 16102413 16102428 PRDM1 JASPAR yes 696474
chr3 16102413 16102428 STAT2 JASPAR yes 696475
chr3 16102413 16102428 PRDM1 JASPAR yes 70945509
chr3 16102413 16102428 STAT2 JASPAR yes 70945510
chr3 16102424 16102438 PLAG1 JASPAR yes 696476
chr3 16102424 16102438 PLAG1 JASPAR yes 70945511
chr3 16102453 16102463 SP1 JASPAR yes 696477
chr3 16102453 16102463 SP1 JASPAR yes 70945512
chr3 16102460 16102464 LFA1 TRANSFAC yes 696478
chr3 16102460 16102464 LFA1 TRANSFAC yes 70945513
chr3 16102493 16102497 NFE TRANSFAC yes 696479
chr3 16102493 16102497 NFE TRANSFAC yes 70945514
chr3 16102494 16102509 ZIC4 JASPAR yes 696480
chr3 16102494 16102509 ZIC4 JASPAR yes 70945515
chr3 16102495 16102509 GLIS3 JASPAR yes 696481
chr3 16102495 16102509 GLIS3 JASPAR yes 70945516
chr3 16102500 16102520 RREB1 JASPAR yes 696482
chr3 16102500 16102520 RREB1 JASPAR yes 70945517
chr3 16102525 16102542 RARA JASPAR yes 696483
chr3 16102525 16102542 RARA JASPAR yes 70945518
chr3 16102531 16102547 SOX4 JASPAR yes 696484
chr3 16102531 16102547 SOX4 JASPAR yes 70945519
chr3 16102533 16102544 ESRRA JASPAR yes 696485
chr3 16102533 16102544 ESRRB JASPAR yes 696486
chr3 16102533 16102544 ESRRA JASPAR yes 70945520
chr3 16102533 16102544 ESRRB JASPAR yes 70945521
chr3 16102534 16102549 NR2C2 JASPAR yes 696487
chr3 16102534 16102549 NR2C2 JASPAR yes 70945522
chr3 16102535 16102543 NR4A2 JASPAR yes 696488
chr3 16102535 16102543 NR4A2 JASPAR yes 70945523
chr3 16102537 16102541 ESR1 TRANSFAC yes 696489
chr3 16102537 16102541 ESR1 TRANSFAC yes 70945524
chr3 16102540 16102561 ZNF263 JASPAR yes 696490
chr3 16102540 16102561 ZNF263 JASPAR yes 70945525
chr3 16102547 16102553 PEA3 TRANSFAC yes 696491
chr3 16102547 16102553 PEA3 TRANSFAC yes 70945526
chr3 16102559 16102573 PAX6 JASPAR yes 696492
chr3 16102559 16102573 PAX6 JASPAR yes 70945527
chr3 16102591 16102602 FOS JASPAR yes 696493
chr3 16102591 16102602 FOSL1 JASPAR yes 696494
chr3 16102591 16102602 FOS JASPAR yes 70945528
chr3 16102591 16102602 FOSL1 JASPAR yes 70945529
chr3 16102593 16102599 JUN TRANSFAC yes 696495
chr3 16102593 16102599 JUN TRANSFAC yes 70945530
chr3 16102652 16102660 GATA3 JASPAR yes 696496
chr3 16102652 16102660 GATA3 JASPAR yes 70945531
chr3 16102669 16102673 YY1 TRANSFAC yes 696497
chr3 16102669 16102673 YY1 TRANSFAC yes 70945532
SNP sites on vista40124[chr3:16102393-16102705]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr3 16102435 rs140547075 G A,C,T
BCL3 PLAG1
6578641
chr3 16102477 rs577716918 A C no 6578642
chr3 16102530 rs145533541 C A
RARA
6578643
chr3 16102531 rs7646948 A G
RARA SOX4
6578644
chr3 16102539 rs78145258 G A
ESR1 ESRRA ESRRB NR2C2 NR4A2 RARA SOX4
6578645
chr3 16102654 rs138111634 T G
GATA3
6578646
chr3 16102672 rs17041846 T C
YY1
6578647
chr3 16102705 rs62233384 A G no 6578648
Genes possibly regulated by vista40124[chr3:16102393-16102705]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista40124[chr3:16102393-16102705]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results